Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 6.7e-70 267.3 142 100.0
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 7.9e-39 164.1 149 60.4
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 3.0e-38 162.2 146 63.0
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 1.1e-37 160.2 115 70.4
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 1.1e-37 160.2 147 62.6
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 2.0e-37 159.5 149 58.4
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 4.4e-37 158.3 148 62.8
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 4.4e-37 158.3 149 58.4
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 4.4e-37 158.3 115 73.0
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 7.4e-37 157.5 147 58.5
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 9.7e-37 157.1 121 67.8
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 2.2e-36 156.0 152 61.8
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 3.7e-36 155.2 143 61.5
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 3.7e-36 155.2 143 62.9
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 4.8e-36 154.8 144 59.7
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 8.2e-36 154.1 143 60.1
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 2.4e-35 152.5 125 65.6
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 3.1e-35 152.1 92 82.6
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 7.0e-35 151.0 149 61.7
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 1.2e-34 150.2 169 50.9
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.0e-34 149.4 143 59.4
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 2.6e-34 149.1 143 58.7
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 2.6e-34 149.1 131 67.2
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 4.5e-34 148.3 115 67.8
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 1.0e-33 147.1 143 60.8
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.3e-33 146.7 113 67.3
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 1.7e-33 146.4 115 66.1
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 1.7e-33 146.4 158 55.7
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 2.2e-33 146.0 115 65.2
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 2.2e-33 146.0 158 55.7
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 2.2e-33 146.0 143 58.0
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 3.8e-33 145.2 120 64.2
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 5.0e-33 144.8 117 63.2
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 5.0e-33 144.8 120 65.0
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 6.5e-33 144.4 88 78.4
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 8.5e-33 144.1 141 54.6
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 1.5e-32 143.3 87 82.8
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 1.5e-32 143.3 149 53.0
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.9e-32 142.9 123 62.6
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 2.5e-32 142.5 114 66.7
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 2.5e-32 142.5 143 60.1
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 4.2e-32 141.7 113 65.5
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 5.5e-32 141.4 88 78.4
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.2e-31 140.2 89 75.3
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.6e-31 139.8 90 75.6
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.6e-31 139.8 89 76.4
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 2.7e-31 139.0 127 60.6
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.7e-31 139.0 90 78.9
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 3.6e-31 138.7 117 63.2
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 3.6e-31 138.7 115 62.6
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 6.1e-31 137.9 87 75.9
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 8.0e-31 137.5 90 73.3
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 1.8e-30 136.3 90 72.2
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.8e-30 136.3 149 53.0
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 2.3e-30 136.0 149 52.3
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 3.0e-30 135.6 91 76.9
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 5.2e-30 134.8 138 54.3
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 5.2e-30 134.8 138 54.3
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.2e-30 134.8 149 51.7
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 6.7e-30 134.4 90 73.3
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 1.2e-29 133.7 108 63.0
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.5e-29 133.3 108 63.9
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.5e-29 133.3 108 63.9
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.5e-29 133.3 113 61.1
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 1.5e-29 133.3 117 61.5
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 2.0e-29 132.9 108 63.9
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 2.0e-29 132.9 92 72.8
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.6e-29 132.5 113 59.3
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 3.3e-29 132.1 92 70.7
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 4.4e-29 131.7 90 74.4
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 5.7e-29 131.3 144 52.8
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 5.7e-29 131.3 127 55.1
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 7.5e-29 131.0 109 62.4
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 7.5e-29 131.0 106 63.2
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.3e-28 130.2 124 58.1
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.7e-28 129.8 89 71.9
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.7e-28 129.8 143 53.8
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 2.2e-28 129.4 121 57.9
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 2.8e-28 129.0 92 70.7
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 3.7e-28 128.6 91 72.5
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 6.3e-28 127.9 142 54.2
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 1.4e-27 126.7 121 57.0
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.8e-27 126.3 88 72.7
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 7.7e-26 120.9 74 75.7
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 1.3e-25 120.2 128 59.4
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 2.2e-25 119.4 115 58.3
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 6.5e-25 117.9 71 76.1
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 3.2e-24 115.5 147 53.1
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 5.5e-24 114.8 107 55.1
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 5.5e-24 114.8 107 55.1
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 1.2e-23 113.6 147 52.4
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 2.1e-23 112.8 64 81.2
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 4.0e-22 108.6 64 78.1
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 4.8e-20 101.7 119 52.9
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 1.1e-19 100.5 107 49.5
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.2e-18 97.1 88 61.4
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 8.6e-17 90.9 71 62.0
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 5.9e-10 68.2 86 44.2
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.0e-09 67.4 94 37.2
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 1.3e-09 67.0 46 69.6
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 6.6e-09 64.7 82 40.2
Actinidia19720 Actinidia chinensis HOM05D007368 ORTHO05D009330 1.2e-07 60.5 90 50.0


User provided reference genes

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