Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g03350 Coffea canephora HOM05D007476 ORTHO05D006998 1.0e-55 220.7 208 100.0
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 2.1e-19 100.1 131 80.2
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 1.4e-15 87.4 131 62.6
Dinv35685 Davidia involucrata HOM05D007476 ORTHO05D006998 2.4e-15 86.7 226 57.5
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 5.3e-15 85.5 204 57.4
Oeu026075.1 Olea europaea HOM05D007476 ORTHO05D006998 2.6e-14 83.2 206 52.9
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 7.6e-14 81.6 199 47.2
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.2e-13 80.1 131 64.9
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 2.2e-13 80.1 131 64.9
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 1.2e-11 74.3 219 44.3
Nitab4.5_0000643g0260 Nicotiana tabacum HOM05D007476 ORTHO05D006998 2.7e-11 73.2 204 65.7
Oeu060068.2 Olea europaea HOM05D007476 ORTHO05D025237 3.5e-11 72.8 170 55.9
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 6.0e-11 72.0 130 57.7
ECA238G2167 Erigeron canadensis HOM05D007476 ORTHO05D006998 1.0e-10 71.2 45 82.2
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.0e-10 71.2 46 80.4
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 1.8e-10 70.5 130 73.1
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 2.3e-10 70.1 45 80.0
vmacro20080 Vaccinium macrocarpon HOM05D007476 ORTHO05D006998 2.3e-10 70.1 135 65.9
Peaxi162Scf00597g00826 Petunia axillaris HOM05D007476 ORTHO05D006998 3.9e-10 69.3 206 52.9
Actinidia05282 Actinidia chinensis HOM05D007476 ORTHO05D006998 1.1e-09 67.8 133 71.4
Migut.J00397 Erythranthe guttata HOM05D020465 ORTHO05D006998 1.1e-09 67.8 207 53.1
HanXRQChr07g0195971 Helianthus annuus HOM05D007476 ORTHO05D006998 1.1e-09 67.8 70 75.7
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.5e-09 67.4 124 41.1
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 1.9e-09 67.0 46 76.1
FAN05G2812 Fragaria x ananassa HOM05D007476 ORTHO05D006998 2.5e-09 66.6 133 69.9
EL10Ac7g17261 Beta vulgaris HOM05D007476 ORTHO05D006998 3.3e-09 66.2 46 78.3
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.3e-09 66.2 133 48.9
Gorai.006G177500 Gossypium raimondii HOM05D007476 ORTHO05D006998 3.3e-09 66.2 115 41.7
Nn2g12939 Nelumbo nucifera HOM05D007476 ORTHO05D006998 5.6e-09 65.5 46 73.9
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 5.6e-09 65.5 134 51.5
Sc20g0004220 Simmondsia chinensis HOM05D007476 ORTHO05D006998 7.4e-09 65.1 44 79.5
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 9.6e-09 64.7 133 54.1
TWI53G1272 Tripterygium wilfordii HOM05D007476 ORTHO05D006998 1.3e-08 64.3 46 76.1
TAR375G0914 Trochodendron aralioides HOM05D000137 ORTHO05D000382 1.3e-08 64.3 44 77.3
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 1.6e-08 63.9 134 47.0
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 2.8e-08 63.2 131 35.9
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 2.8e-08 63.2 210 41.9
Actinidia11227 Actinidia chinensis HOM05D007476 ORTHO05D006998 3.7e-08 62.8 134 70.1
Ah.08g212030 Amaranthus hybridus HOM05D007476 ORTHO05D006998 3.7e-08 62.8 40 80.0
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 6.2e-08 62.0 45 71.1
Nitab4.5_0002073g0060 Nicotiana tabacum HOM05D000217 ORTHO05D000121 6.2e-08 62.0 183 56.3
CDE02G0064 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 1.4e-07 60.8 47 68.1
Thhalv10014656m.g Eutrema salsugineum HOM05D010138 ORTHO05D006998 1.4e-07 60.8 46 69.6
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 1.8e-07 60.5 41 73.2
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 1.8e-07 60.5 40 82.5
AL6G12020 Arabidopsis lyrata HOM05D010138 ORTHO05D006998 2.4e-07 60.1 48 68.8
AT5G02770 Arabidopsis thaliana HOM05D010138 ORTHO05D006998 2.4e-07 60.1 48 68.8
DCAR_020869 Daucus carota HOM05D007476 ORTHO05D006998 2.4e-07 60.1 128 71.9
Hma1.2p1_0111F.1_g053570 Hydrangea macrophylla HOM05D007476 ORTHO05D006998 4.0e-07 59.3 206 52.4
BolC7t43445H Brassica oleracea HOM05D001366 ORTHO05D008529 5.3e-07 58.9 46 67.4
CARHR210610 Cardamine hirsuta HOM05D010138 ORTHO05D006998 5.3e-07 58.9 46 65.2
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 6.9e-07 58.5 46 67.4
Carub.0006s0153 Capsella rubella HOM05D010138 ORTHO05D006998 1.2e-06 57.8 51 62.7
GSVIVG01025570001 Vitis vinifera HOM05D007476 ORTHO05D006998 1.2e-06 57.8 119 60.5
CDE09G0878 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 1.5e-06 57.4 47 66.0
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 2.6e-06 56.6 205 43.4
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 3.4e-06 56.2 205 45.4
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 4.5e-06 55.8 131 48.9
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 7.6e-06 55.1 126 38.9
Nitab4.5_0008580g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 9.9e-06 54.7 119 67.2


User provided reference genes

Program Settings