Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.2e-105 385.6 186 100.0
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.3e-62 242.7 178 61.8
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 4.3e-61 238.4 186 60.8
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.7e-60 236.5 178 61.8
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 2.8e-60 235.7 126 73.8
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 2.8e-60 235.7 180 60.6
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 5.3e-59 231.5 125 74.4
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 6.9e-59 231.1 181 59.1
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 4.5e-58 228.4 185 56.2
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 5.9e-58 228.0 179 58.7
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 1.0e-57 227.3 121 79.3
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 3.8e-57 225.3 181 58.0
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 3.8e-57 225.3 126 73.8
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 5.0e-57 224.9 126 74.6
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 5.0e-57 224.9 123 74.0
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 5.0e-57 224.9 160 61.2
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 3.2e-56 222.2 183 60.1
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 1.6e-55 219.9 182 58.2
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 6.1e-55 218.0 180 56.7
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 6.1e-55 218.0 183 57.9
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.0e-54 217.2 180 56.7
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 1.0e-54 217.2 174 58.0
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 5.1e-54 214.9 180 56.1
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 6.7e-54 214.5 177 57.6
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 8.8e-54 214.2 127 70.9
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.6e-53 212.6 174 57.5
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 2.6e-53 212.6 159 59.7
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 3.3e-53 212.2 119 73.9
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 4.4e-53 211.8 123 68.3
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 4.4e-53 211.8 173 56.1
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 7.4e-53 211.1 121 69.4
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.3e-52 210.3 119 74.8
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 2.2e-52 209.5 119 72.3
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 2.8e-52 209.1 120 70.0
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 6.3e-52 208.0 157 65.6
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.8e-51 206.5 125 68.8
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 3.1e-51 205.7 142 62.0
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 4.1e-51 205.3 119 72.3
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 7.0e-51 204.5 162 56.8
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 7.0e-51 204.5 147 61.9
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 7.0e-51 204.5 119 70.6
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 9.1e-51 204.1 126 67.5
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 9.1e-51 204.1 157 58.6
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 1.2e-50 203.8 145 63.4
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 1.2e-50 203.8 132 62.9
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 1.5e-50 203.4 121 68.6
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 1.5e-50 203.4 126 67.5
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 1.5e-50 203.4 124 66.1
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 2.0e-50 203.0 175 54.3
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 2.0e-50 203.0 121 69.4
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 2.0e-50 203.0 121 69.4
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 2.0e-50 203.0 126 67.5
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 2.6e-50 202.6 121 67.8
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 3.5e-50 202.2 142 60.6
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 3.5e-50 202.2 127 64.6
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 4.5e-50 201.8 127 65.4
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 5.9e-50 201.4 150 59.3
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 7.7e-50 201.1 159 56.0
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.3e-49 200.3 121 67.8
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 1.7e-49 199.9 146 57.5
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 1.7e-49 199.9 120 67.5
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.7e-49 199.9 119 68.9
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 2.9e-49 199.1 179 50.8
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 6.5e-49 198.0 126 64.3
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 6.5e-49 198.0 125 61.6
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.5e-48 196.1 123 63.4
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 5.5e-48 194.9 124 61.3
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.5e-48 194.9 124 61.3
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.5e-48 194.9 124 61.3
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 5.5e-48 194.9 135 61.5
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 5.5e-48 194.9 108 74.1
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 7.2e-48 194.5 156 59.0
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 9.4e-48 194.1 124 64.5
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 4.7e-47 191.8 147 56.5
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 1.0e-46 190.7 121 62.8
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 1.4e-46 190.3 179 48.6
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 1.4e-46 190.3 190 51.1
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 3.3e-45 185.7 121 64.5
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 5.7e-45 184.9 122 60.7
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.8e-44 182.6 126 62.7
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 9.1e-43 177.6 120 60.0
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 1.2e-42 177.2 124 59.7
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 6.5e-41 171.4 94 69.1
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 1.5e-40 170.2 125 57.6
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 3.6e-39 165.6 106 64.2
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 6.1e-39 164.9 117 60.7
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.0e-38 164.1 181 47.5
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 6.7e-38 161.4 113 53.1
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 1.2e-37 160.6 93 65.6
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 2.0e-37 159.8 106 62.3
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 4.4e-37 158.7 90 75.6
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 8.3e-36 154.5 117 57.3
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 1.2e-34 150.6 132 52.3
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.3e-33 147.1 117 55.6
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 2.2e-28 129.8 71 71.8
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.0e-26 123.2 87 57.5
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 4.1e-19 99.0 178 32.6
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 4.5e-18 95.5 59 69.5
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 1.9e-11 73.6 99 40.4
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 2.4e-11 73.2 100 39.0
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 1.2e-10 70.9 39 64.1


User provided reference genes

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