Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 1.5e-58 229.2 105 100.0
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 6.5e-38 160.6 80 88.8
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 8.5e-38 160.2 86 83.7
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.1e-37 159.8 83 85.5
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.1e-37 159.8 83 86.7
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 1.9e-37 159.1 86 82.6
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 3.2e-37 158.3 87 79.3
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 4.2e-37 157.9 87 79.3
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 4.2e-37 157.9 87 79.3
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 4.2e-37 157.9 87 78.2
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 9.4e-37 156.8 83 84.3
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 2.1e-36 155.6 82 82.9
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 2.7e-36 155.2 81 84.0
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 4.7e-36 154.5 78 85.9
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 4.7e-36 154.5 83 80.7
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 7.9e-36 153.7 81 84.0
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.0e-35 153.3 84 78.6
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.4e-35 152.9 82 80.5
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.4e-35 152.9 82 81.7
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 2.3e-35 152.1 86 76.7
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 3.0e-35 151.8 81 80.2
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 3.0e-35 151.8 80 82.5
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 3.0e-35 151.8 83 80.7
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 3.0e-35 151.8 83 80.7
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 3.9e-35 151.4 82 79.3
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 3.9e-35 151.4 92 75.0
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 5.1e-35 151.0 82 80.5
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 5.1e-35 151.0 80 83.8
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 6.7e-35 150.6 80 83.8
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.7e-35 150.6 81 80.2
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 6.7e-35 150.6 84 78.6
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 8.8e-35 150.2 82 79.3
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 1.1e-34 149.8 83 80.7
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.5e-34 149.4 83 77.1
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.5e-34 149.4 84 78.6
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.0e-34 149.1 82 78.0
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 2.0e-34 149.1 81 79.0
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 2.0e-34 149.1 83 79.5
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 2.6e-34 148.7 83 77.1
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 2.6e-34 148.7 82 78.0
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 3.3e-34 148.3 87 74.7
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 3.3e-34 148.3 84 77.4
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 4.4e-34 147.9 84 77.4
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 4.4e-34 147.9 82 78.0
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 5.7e-34 147.5 83 77.1
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 5.7e-34 147.5 80 81.2
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 5.7e-34 147.5 80 82.5
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 5.7e-34 147.5 81 79.0
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 7.4e-34 147.1 82 76.8
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 9.7e-34 146.7 83 77.1
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 9.7e-34 146.7 83 77.1
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 9.7e-34 146.7 83 75.9
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.3e-33 146.4 79 81.0
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.3e-33 146.4 79 78.5
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 1.7e-33 146.0 80 77.5
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 1.7e-33 146.0 88 75.0
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 2.2e-33 145.6 84 72.6
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 3.7e-33 144.8 80 78.8
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 3.7e-33 144.8 80 78.8
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 3.7e-33 144.8 80 78.8
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 4.8e-33 144.4 79 79.7
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 6.3e-33 144.1 81 76.5
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 6.3e-33 144.1 83 73.5
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 6.3e-33 144.1 89 71.9
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 8.2e-33 143.7 80 77.5
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 1.1e-32 143.3 80 77.5
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 1.4e-32 142.9 80 76.2
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 1.4e-32 142.9 76 80.3
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 2.4e-32 142.1 83 77.1
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 3.1e-32 141.7 79 77.2
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 5.3e-32 141.0 84 77.4
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 1.2e-31 139.8 89 68.5
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.6e-31 139.4 82 72.0
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 2.0e-31 139.0 73 79.5
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 4.5e-31 137.9 83 69.9
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 7.7e-31 137.1 69 84.1
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 7.7e-31 137.1 69 85.5
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 1.7e-30 136.0 82 70.7
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 6.5e-30 134.0 84 67.9
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.2e-28 129.8 76 72.4
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 8.0e-28 127.1 68 80.9
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 1.8e-27 125.9 77 74.0
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 3.0e-27 125.2 73 76.7
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 6.7e-27 124.0 68 82.4
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.1e-26 123.2 75 73.3
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.5e-26 122.9 62 82.3
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.5e-26 122.9 67 80.6
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 3.3e-26 121.7 68 80.9
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 3.3e-26 121.7 68 79.4
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 5.7e-26 120.9 68 80.9
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.7e-25 119.4 67 80.6
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 3.7e-25 118.2 68 76.5
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 6.3e-25 117.5 68 77.9
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 2.7e-23 112.1 71 71.8
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 2.2e-22 109.0 71 62.0
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 8.5e-22 107.1 65 75.4
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.5e-21 106.3 97 55.7
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 7.5e-18 94.0 63 58.7
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 2.2e-17 92.4 69 63.8
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 6.5e-14 80.9 48 75.0
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 2.7e-07 58.9 37 67.6


User provided reference genes

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