Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 3.0e-70 268.5 142 100.0
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 9.1e-43 177.2 146 71.2
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.5e-42 176.4 144 69.4
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 4.5e-42 174.9 142 69.0
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 8.5e-41 170.6 144 70.8
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 8.5e-41 170.6 142 67.6
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 8.5e-41 170.6 142 67.6
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 1.1e-40 170.2 143 67.8
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.9e-40 169.5 108 79.6
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 5.5e-40 167.9 142 68.3
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 5.5e-40 167.9 143 67.8
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.1e-39 166.0 122 71.3
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 2.1e-39 166.0 142 64.8
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 4.7e-39 164.9 141 63.1
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 4.7e-39 164.9 138 65.9
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 6.1e-39 164.5 142 65.5
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.4e-38 163.3 149 63.1
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 1.4e-38 163.3 138 65.9
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.4e-38 163.3 113 72.6
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 1.8e-38 162.9 96 84.4
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.8e-38 162.9 142 66.9
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.8e-38 162.9 142 66.2
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 2.3e-38 162.5 97 83.5
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 2.3e-38 162.5 141 64.5
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 2.3e-38 162.5 143 64.3
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 3.0e-38 162.2 126 68.3
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 3.0e-38 162.2 142 66.2
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 3.9e-38 161.8 132 67.4
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 3.9e-38 161.8 142 64.8
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 3.9e-38 161.8 139 66.9
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 3.9e-38 161.8 92 87.0
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 6.7e-38 161.0 141 66.0
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 6.7e-38 161.0 92 88.0
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 8.8e-38 160.6 142 65.5
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 8.8e-38 160.6 108 76.9
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 8.8e-38 160.6 142 65.5
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.1e-37 160.2 146 65.8
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.5e-37 159.8 144 62.5
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 2.0e-37 159.5 96 82.3
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 2.6e-37 159.1 144 65.3
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 4.4e-37 158.3 144 64.6
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 4.4e-37 158.3 101 79.2
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 4.4e-37 158.3 143 65.0
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 9.7e-37 157.1 142 66.9
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 1.3e-36 156.8 146 65.1
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 1.7e-36 156.4 97 81.4
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 1.7e-36 156.4 123 69.9
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 2.8e-36 155.6 145 62.1
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 2.8e-36 155.6 117 72.6
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 3.7e-36 155.2 145 62.1
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 4.8e-36 154.8 126 65.9
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 8.2e-36 154.1 142 63.4
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 8.2e-36 154.1 112 70.5
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 8.2e-36 154.1 96 81.2
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 1.1e-35 153.7 144 62.5
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 1.4e-35 153.3 143 60.8
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.8e-35 152.9 142 62.0
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 2.4e-35 152.5 142 61.3
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.4e-35 152.5 142 61.3
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 2.4e-35 152.5 89 86.5
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 2.4e-35 152.5 92 81.5
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 4.1e-35 151.8 142 65.5
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 5.3e-35 151.4 94 78.7
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 5.3e-35 151.4 92 82.6
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 9.1e-35 150.6 89 83.1
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 9.1e-35 150.6 142 61.3
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 2.6e-34 149.1 144 62.5
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 2.6e-34 149.1 144 62.5
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 4.5e-34 148.3 92 80.4
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 5.9e-34 147.9 142 60.6
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 5.9e-34 147.9 142 60.6
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 5.9e-34 147.9 94 77.7
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 5.9e-34 147.9 92 79.3
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 7.7e-34 147.5 97 75.3
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 7.7e-34 147.5 138 59.4
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 1.0e-33 147.1 89 82.0
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.3e-33 146.7 147 60.5
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 1.7e-33 146.4 97 75.3
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 2.9e-33 145.6 161 57.1
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 3.8e-33 145.2 146 60.3
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 3.8e-33 145.2 93 77.4
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 8.5e-33 144.1 143 59.4
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 8.5e-33 144.1 83 85.5
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 8.5e-33 144.1 114 68.4
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 1.1e-32 143.7 118 65.3
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.1e-32 143.7 130 61.5
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 1.5e-32 143.3 142 55.6
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 1.5e-32 143.3 91 78.0
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.9e-32 142.9 87 82.8
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 4.2e-32 141.7 84 79.8
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 7.2e-32 141.0 142 57.0
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.6e-31 139.8 115 64.3
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.6e-31 139.8 118 61.9
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 2.7e-31 139.0 107 68.2
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 6.1e-31 137.9 142 54.9
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 8.0e-31 137.5 82 81.7
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 8.8e-30 134.0 84 79.8
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 2.0e-29 132.9 142 54.2
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 3.3e-29 132.1 144 53.5
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 4.4e-29 131.7 86 74.4
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 2.8e-28 129.0 142 52.8
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 2.2e-25 119.4 97 63.9
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 2.3e-22 109.4 140 49.3
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 1.2e-15 87.0 46 84.8
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 6.1e-15 84.7 46 84.8
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 3.3e-08 62.4 62 59.7
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 9.5e-08 60.8 110 41.8


User provided reference genes

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