Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 7.5e-100 367.1 173 100.0
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 3.0e-80 302.0 168 82.1
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 6.6e-80 300.8 173 80.3
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.9e-79 299.3 173 80.3
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 4.3e-79 298.1 168 82.1
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.2e-78 294.3 171 80.1
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.2e-78 294.3 171 80.1
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 1.4e-77 293.1 171 78.9
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 9.0e-77 290.4 168 80.4
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.5e-76 289.7 171 78.4
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 2.0e-76 289.3 172 78.5
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 7.6e-76 287.3 173 75.7
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 1.3e-75 286.6 168 78.0
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 2.2e-75 285.8 171 76.0
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 2.9e-75 285.4 167 79.6
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 3.8e-75 285.0 173 74.6
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 8.4e-75 283.9 173 77.5
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 1.1e-74 283.5 168 77.4
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.9e-74 282.7 173 75.1
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 1.9e-74 282.7 171 76.6
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 3.2e-74 282.0 173 76.9
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 2.7e-73 278.9 168 76.2
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 6.0e-73 277.7 169 78.1
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 5.1e-72 274.6 168 76.2
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 5.1e-72 274.6 168 76.2
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 6.6e-72 274.2 167 76.0
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 8.7e-72 273.9 168 76.2
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 8.7e-72 273.9 173 72.8
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 1.5e-71 273.1 174 75.3
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 2.5e-71 272.3 168 73.2
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.6e-71 271.2 173 72.8
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 9.6e-71 270.4 168 75.6
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.3e-70 270.0 173 72.3
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 1.6e-70 269.6 171 74.9
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 2.1e-70 269.2 168 76.8
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 3.6e-70 268.5 168 73.2
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 3.6e-70 268.5 173 71.1
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 6.2e-70 267.7 173 71.7
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 8.1e-70 267.3 166 76.5
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 8.1e-70 267.3 171 73.1
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 1.4e-69 266.5 168 76.2
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 1.4e-69 266.5 168 73.8
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 2.4e-69 265.8 169 75.1
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 4.0e-69 265.0 168 75.0
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 5.3e-69 264.6 173 70.5
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 5.3e-69 264.6 166 75.9
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 5.3e-69 264.6 167 71.9
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 6.9e-69 264.2 168 73.2
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 6.9e-69 264.2 168 73.2
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 1.5e-68 263.1 174 73.0
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 7.6e-68 260.8 167 70.7
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 9.9e-68 260.4 173 70.5
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.3e-67 260.0 169 74.0
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 2.9e-67 258.8 170 73.5
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.9e-67 258.8 171 71.3
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.1e-66 256.9 171 70.8
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 1.9e-66 256.1 174 70.7
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 1.9e-66 256.1 168 70.2
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 4.2e-66 255.0 171 70.8
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 4.2e-66 255.0 168 72.0
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 2.1e-65 252.7 165 69.7
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 2.7e-65 252.3 171 69.0
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.3e-64 250.0 171 68.4
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 8.7e-64 247.3 168 70.8
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 7.4e-63 244.2 169 65.7
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 7.4e-63 244.2 171 69.0
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 3.7e-62 241.9 163 66.3
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 3.7e-62 241.9 161 66.5
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 3.7e-62 241.9 171 68.4
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 4.8e-62 241.5 162 66.0
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 6.2e-62 241.1 163 66.9
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 6.2e-62 241.1 162 66.7
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.4e-61 239.2 169 65.1
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 3.1e-61 238.8 163 65.6
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 4.0e-61 238.4 169 68.0
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 5.3e-61 238.0 163 65.6
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 6.9e-61 237.7 159 70.4
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 5.8e-60 234.6 167 65.9
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 7.6e-60 234.2 167 65.9
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 1.0e-59 233.8 169 63.3
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 1.9e-58 229.6 149 71.8
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 3.2e-58 228.8 165 66.1
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 4.2e-58 228.4 168 65.5
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 4.2e-58 228.4 168 66.1
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 7.1e-58 227.6 168 65.5
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 4.6e-57 224.9 144 70.8
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 4.6e-57 224.9 170 64.1
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 5.1e-56 221.5 167 62.3
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.5e-55 219.9 170 64.1
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 9.6e-55 217.2 143 70.6
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 1.6e-54 216.5 142 67.6
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.8e-54 215.7 167 61.1
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 1.4e-53 213.4 142 66.9
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.8e-53 213.0 170 61.8
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 2.4e-53 212.6 170 60.6
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 3.4e-52 208.8 164 56.7
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 7.6e-52 207.6 172 60.5
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 1.7e-51 206.5 168 60.7
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 1.1e-50 203.8 163 60.7
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 2.5e-50 202.6 132 73.5
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 6.1e-49 198.0 176 57.4
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 3.0e-48 195.7 174 57.5
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.1e-47 193.7 135 68.9
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 2.4e-45 186.0 168 54.2
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 4.1e-45 185.3 167 50.3
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.4e-44 182.2 121 68.6
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 7.7e-44 181.0 173 49.7
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 2.7e-41 172.6 169 47.3
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 3.9e-40 168.7 159 55.3
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 4.3e-39 165.2 145 55.2
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 2.1e-33 146.4 152 48.0
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 7.9e-33 144.4 130 56.2
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 7.9e-33 144.4 169 45.6
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.6e-31 139.4 92 72.8
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 3.7e-30 135.6 88 75.0
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.8e-29 133.3 109 60.6
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 2.8e-22 109.4 155 41.3
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.9e-18 96.7 51 78.4
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 2.3e-16 89.7 122 44.3
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 1.6e-12 77.0 44 77.3


User provided reference genes

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