Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 2.2e-304 1048.1 509 100.0
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 9.6e-236 820.1 518 77.6
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.6e-233 812.0 507 76.1
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 7.6e-233 810.4 510 76.3
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 9.9e-233 810.1 516 76.2
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 9.9e-233 810.1 507 76.1
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 1.3e-232 809.7 517 74.1
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.8e-232 808.1 517 74.1
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.4e-231 806.2 516 73.8
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 9.3e-231 803.5 505 76.0
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.5e-230 801.6 517 73.9
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 4.6e-230 801.2 512 75.2
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.5e-228 795.4 484 77.9
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 7.3e-228 793.9 516 75.6
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.3e-227 793.1 506 74.5
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.6e-227 792.7 515 74.8
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 5.3e-226 787.7 501 74.9
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 5.3e-226 787.7 513 74.7
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 9.0e-226 786.9 508 75.0
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.3e-224 783.1 519 72.4
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.3e-224 783.1 517 73.5
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 4.9e-224 781.2 501 74.5
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 3.2e-223 778.5 516 73.3
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 4.2e-223 778.1 506 73.5
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 4.2e-223 778.1 496 75.4
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.4e-223 777.7 516 73.1
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 2.1e-222 775.8 492 76.2
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.1e-222 775.8 516 72.9
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 2.7e-222 775.4 507 72.4
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 4.6e-222 774.6 527 71.7
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.6e-222 774.6 516 72.7
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.6e-222 774.6 516 72.7
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 6.0e-222 774.2 516 72.3
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 7.9e-222 773.9 513 71.7
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.0e-221 773.5 489 76.3
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 6.7e-221 770.8 580 66.2
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 3.3e-220 768.5 512 72.1
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 4.3e-220 768.1 513 73.7
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 4.3e-220 768.1 513 73.7
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 4.3e-220 768.1 517 72.1
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.1e-219 765.8 528 71.2
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 2.1e-219 765.8 515 72.8
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 3.1e-218 761.9 548 68.4
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 6.9e-218 760.8 508 72.4
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 2.9e-216 755.4 510 70.8
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 2.9e-216 755.4 497 71.8
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 8.4e-216 753.8 512 71.3
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 1.2e-214 750.0 518 71.2
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 3.5e-214 748.4 511 71.0
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 2.3e-213 745.7 510 71.2
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 8.7e-213 743.8 513 70.8
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.9e-212 742.7 514 68.7
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.9e-212 742.7 506 69.8
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 2.5e-212 742.3 511 71.4
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 4.3e-212 741.5 452 76.8
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 7.4e-212 740.7 519 70.3
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 9.6e-212 740.3 517 68.7
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 9.6e-212 740.3 507 71.2
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 2.8e-211 738.8 491 70.5
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 4.8e-211 738.0 512 69.5
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 4.8e-211 738.0 516 70.5
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 8.2e-211 737.3 508 68.7
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.4e-210 736.5 510 69.6
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.8e-210 736.1 521 68.5
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 2.4e-210 735.7 495 69.7
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 3.1e-210 735.3 513 68.4
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 4.0e-210 734.9 513 68.4
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 3.4e-209 731.9 498 69.3
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 5.8e-209 731.1 500 70.8
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 5.8e-209 731.1 517 69.8
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 7.6e-209 730.7 511 67.5
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 2.2e-208 729.2 518 68.9
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.1e-207 726.9 514 68.5
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.4e-207 726.5 503 67.8
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.9e-207 726.1 490 70.2
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 3.2e-207 725.3 492 70.5
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 3.2e-207 725.3 496 70.2
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 3.5e-206 721.8 496 70.0
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 3.5e-206 721.8 496 70.0
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 4.6e-206 721.5 498 70.3
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 6.3e-203 711.1 507 66.7
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 1.7e-200 703.0 520 66.5
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.1e-199 700.3 516 66.7
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 2.5e-199 699.1 514 66.0
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.2e-198 696.8 493 68.0
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 4.3e-196 688.3 527 63.9
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 7.4e-196 687.6 442 75.6
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 9.7e-196 687.2 516 64.5
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 2.4e-194 682.6 516 64.0
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.5e-193 679.9 511 67.3
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.2e-192 676.0 510 66.3
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.2e-190 670.2 494 66.6
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 6.1e-190 667.9 430 72.1
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 8.0e-182 641.0 513 61.4
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.0e-181 640.6 353 84.1
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 2.4e-178 629.4 514 59.1
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 1.0e-176 624.0 429 70.4
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 4.4e-172 608.6 482 60.4
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 2.2e-171 606.3 499 58.5
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 1.5e-167 593.6 501 60.1
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.9e-167 593.2 469 60.3
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 5.9e-161 571.6 408 68.6
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.2e-124 451.1 417 53.0
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.3e-120 437.6 394 52.5
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 8.1e-118 428.3 379 54.4
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.1e-117 427.9 457 49.7
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 1.7e-115 420.6 259 73.7
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 4.8e-110 402.5 391 48.6
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.9e-75 287.0 175 75.4
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 3.5e-68 263.5 162 72.2
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 2.9e-51 207.2 120 80.8
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 5.7e-39 166.4 112 69.6
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.6e-33 148.3 177 46.3
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 6.1e-33 146.4 345 30.4
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.2e-22 111.3 81 60.5
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 3.1e-16 90.9 59 64.4
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 1.5e-10 72.0 65 53.8
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 1.5e-10 72.0 65 53.8
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 1.5e-10 72.0 65 53.8
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 2.4e-08 64.7 68 36.8
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 2.0e-07 61.6 114 28.1
Oeu056790.1 Olea europaea HOM05D006476 ORTHO05D292299 2.9e-06 57.8 67 46.3


User provided reference genes

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