Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 8.3e-34 146.4 69 100.0
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 3.4e-27 124.4 63 93.7
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 7.6e-27 123.2 63 92.1
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 2.9e-26 121.3 62 90.3
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 4.9e-26 120.6 65 86.2
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 4.9e-26 120.6 65 86.2
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 6.4e-26 120.2 65 86.2
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 1.1e-25 119.4 62 88.7
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 1.1e-25 119.4 62 88.7
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 4.1e-25 117.5 64 84.4
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 5.4e-25 117.1 68 82.4
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 7.1e-25 116.7 63 88.9
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 9.2e-25 116.3 62 82.3
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 1.6e-24 115.5 65 81.5
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 1.6e-24 115.5 62 83.9
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 3.5e-24 114.4 62 85.5
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 3.5e-24 114.4 66 83.3
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 3.5e-24 114.4 66 83.3
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 4.6e-24 114.0 63 81.0
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 6.0e-24 113.6 58 89.7
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 7.8e-24 113.2 64 79.7
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.0e-23 112.8 63 81.0
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.0e-23 112.8 63 81.0
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 1.0e-23 112.8 60 83.3
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 85.5
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 85.5
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 85.5
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 85.5
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 85.5
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 85.5
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 85.5
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 83.9
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 2.3e-23 111.7 63 82.5
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 2.3e-23 111.7 65 78.5
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 2.3e-23 111.7 63 79.4
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 2.3e-23 111.7 64 81.2
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 3.0e-23 111.3 58 86.2
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 3.0e-23 111.3 68 75.0
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 3.0e-23 111.3 64 78.1
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 3.9e-23 110.9 63 85.7
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 5.1e-23 110.5 63 79.4
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 6.6e-23 110.2 60 86.7
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 8.6e-23 109.8 59 84.7
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 8.6e-23 109.8 62 79.0
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 8.6e-23 109.8 65 78.5
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.5e-22 109.0 62 79.0
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.5e-22 109.0 57 86.0
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 1.5e-22 109.0 62 80.6
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 1.9e-22 108.6 61 83.6
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 1.9e-22 108.6 61 83.6
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 3.3e-22 107.8 59 84.7
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 4.3e-22 107.5 53 90.6
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 4.3e-22 107.5 53 90.6
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 4.3e-22 107.5 63 77.8
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 5.6e-22 107.1 67 77.6
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 1.2e-21 105.9 56 83.9
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 2.1e-21 105.1 61 80.3
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 2.1e-21 105.1 61 80.3
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 2.1e-21 105.1 68 76.5
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 2.1e-21 105.1 57 82.5
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 4.7e-21 104.0 63 71.4
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 4.7e-21 104.0 60 76.7
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 4.7e-21 104.0 60 76.7
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 4.7e-21 104.0 60 76.7
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 4.7e-21 104.0 60 76.7
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 4.7e-21 104.0 60 76.7
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 6.2e-21 103.6 56 83.9
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 6.2e-21 103.6 60 75.0
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 8.1e-21 103.2 60 75.0
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 1.1e-20 102.8 60 75.0
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 1.1e-20 102.8 60 75.0
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 1.1e-20 102.8 60 75.0
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 1.1e-20 102.8 60 75.0
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 1.1e-20 102.8 60 75.0
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 1.1e-20 102.8 62 74.2
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 1.4e-20 102.4 60 75.0
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 1.4e-20 102.4 63 77.8
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 1.4e-20 102.4 60 75.0
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 1.8e-20 102.1 63 73.0
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.4e-20 101.7 57 80.7
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 4.0e-20 100.9 58 75.9
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 4.0e-20 100.9 58 75.9
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 5.2e-20 100.5 63 71.4
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 5.2e-20 100.5 60 71.7
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 6.9e-20 100.1 55 81.8
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.2e-19 99.4 61 75.4
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.2e-19 99.4 56 78.6
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 1.5e-19 99.0 57 77.2
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 3.4e-19 97.8 63 77.8
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 2.9e-18 94.7 50 84.0
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 1.7e-15 85.5 57 66.7
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 2.3e-15 85.1 64 57.8
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 7.3e-14 80.1 56 69.6
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 1.6e-13 79.0 46 80.4
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 4.8e-13 77.4 47 72.3
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 6.2e-13 77.0 44 77.3
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 4.9e-10 67.4 37 83.8
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 1.9e-09 65.5 55 54.5
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.9e-09 65.5 52 51.9
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.9e-09 65.5 52 51.9
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 7.1e-09 63.5 35 80.0
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.2e-08 62.8 36 77.8
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.6e-08 62.4 36 77.8
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.6e-08 62.4 36 77.8
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 2.1e-08 62.0 53 50.9
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 3.9e-07 57.8 31 80.6


User provided reference genes

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