Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 1.0e-70 270.0 143 100.0
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 9.2e-35 150.6 140 59.3
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 2.5e-32 142.5 132 59.1
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 7.3e-32 141.0 149 57.0
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 9.5e-32 140.6 135 57.8
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.6e-31 139.8 127 59.1
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 2.1e-31 139.4 116 63.8
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 4.7e-31 138.3 125 62.4
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 6.1e-31 137.9 141 56.0
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 1.4e-30 136.7 113 65.5
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.4e-30 136.7 135 54.1
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.4e-30 136.7 143 54.5
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 6.8e-30 134.4 142 56.3
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.5e-29 133.3 132 55.3
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 2.6e-29 132.5 126 59.5
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 3.4e-29 132.1 95 67.4
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 4.4e-29 131.7 109 63.3
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 5.8e-29 131.3 98 66.3
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 5.8e-29 131.3 125 56.0
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 7.5e-29 131.0 139 51.8
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 7.5e-29 131.0 140 53.6
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 7.5e-29 131.0 139 54.0
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 9.8e-29 130.6 125 57.6
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 9.8e-29 130.6 141 51.8
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 1.7e-28 129.8 130 54.6
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 2.2e-28 129.4 128 56.2
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 2.2e-28 129.4 128 53.9
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.9e-28 129.0 129 58.1
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 8.3e-28 127.5 92 72.8
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 8.3e-28 127.5 91 68.1
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 1.1e-27 127.1 113 60.2
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 1.8e-27 126.3 133 54.9
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 3.2e-27 125.6 123 58.5
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 3.2e-27 125.6 120 55.0
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 3.2e-27 125.6 125 56.0
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 5.4e-27 124.8 101 61.4
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 5.4e-27 124.8 134 51.5
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 5.4e-27 124.8 140 50.7
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 9.2e-27 124.0 137 51.1
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 2.0e-26 122.9 123 56.9
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 2.0e-26 122.9 114 57.9
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 2.0e-26 122.9 90 70.0
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 2.7e-26 122.5 122 54.1
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 3.5e-26 122.1 110 57.3
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 4.6e-26 121.7 139 51.1
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 6.0e-26 121.3 137 51.1
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 6.0e-26 121.3 129 52.7
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.0e-25 120.6 108 54.6
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 1.3e-25 120.2 133 51.1
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.3e-25 120.2 117 55.6
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.7e-25 119.8 135 51.1
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.7e-25 119.8 127 53.5
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 1.7e-25 119.8 120 54.2
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.7e-25 119.8 122 55.7
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.7e-25 119.8 130 51.5
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 2.3e-25 119.4 122 54.9
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 3.0e-25 119.0 124 52.4
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 3.0e-25 119.0 127 52.8
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 3.9e-25 118.6 118 54.2
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 3.9e-25 118.6 138 51.4
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 3.9e-25 118.6 127 52.8
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 5.0e-25 118.2 157 49.7
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.6e-25 117.9 101 61.4
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 8.6e-25 117.5 117 54.7
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 8.6e-25 117.5 106 59.4
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 8.6e-25 117.5 89 64.0
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.1e-24 117.1 104 55.8
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.1e-24 117.1 101 61.4
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.5e-24 116.7 136 46.3
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.5e-24 116.7 108 57.4
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 1.9e-24 116.3 113 55.8
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.5e-24 115.9 108 57.4
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 2.5e-24 115.9 82 67.1
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 3.3e-24 115.5 121 54.5
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 3.3e-24 115.5 110 60.0
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 4.3e-24 115.2 128 50.8
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 9.5e-24 114.0 102 53.9
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 9.5e-24 114.0 102 53.9
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 2.1e-23 112.8 131 48.9
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 2.1e-23 112.8 105 52.4
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 6.2e-23 111.3 103 56.3
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 8.0e-23 110.9 117 48.7
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.1e-22 110.5 126 47.6
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.4e-22 110.2 95 56.8
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.3e-22 109.4 86 60.5
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 5.2e-22 108.2 81 67.9
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 5.2e-22 108.2 102 54.9
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 6.8e-22 107.8 136 44.1
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 2.0e-21 106.3 136 47.8
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 5.8e-21 104.8 108 51.9
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 9.8e-21 104.0 129 45.7
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 2.2e-20 102.8 119 48.7
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 2.2e-20 102.8 89 57.3
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 2.9e-20 102.4 123 47.2
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.9e-20 102.4 89 58.4
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 6.4e-20 101.3 113 48.7
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 3.2e-19 99.0 75 65.3
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 2.1e-18 96.3 125 44.8
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.0e-17 94.0 144 38.2
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 1.0e-17 94.0 72 68.1
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.3e-17 93.6 105 51.4
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.3e-17 92.8 114 50.9
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 4.3e-16 88.6 120 48.3
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 5.6e-16 88.2 101 51.5
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 4.7e-15 85.1 122 37.7
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 6.2e-15 84.7 129 37.2
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 8.1e-15 84.3 113 41.6
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 3.1e-14 82.4 85 47.1
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 5.2e-14 81.6 90 46.7
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 2.0e-13 79.7 130 36.2
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 8.3e-12 74.3 125 38.4
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 1.0e-09 67.4 85 37.6


User provided reference genes

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