Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 6.3e-308 1060.1 586 100.0
Cc00_g31880 Coffea canephora HOM05D006765 ORTHO05D008554 4.8e-215 751.5 432 100.0
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 3.5e-64 250.4 280 51.1
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 1.7e-63 248.1 211 59.7
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 6.6e-63 246.1 240 56.2
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 5.6e-62 243.0 261 52.9
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 2.8e-61 240.7 215 57.2
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 2.8e-61 240.7 206 62.1
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.4e-60 238.4 263 52.9
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 5.2e-60 236.5 263 52.9
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.2e-59 235.3 261 52.5
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 4.4e-59 233.4 180 66.1
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 1.7e-58 231.5 221 55.2
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 1.7e-58 231.5 201 59.2
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 2.2e-58 231.1 227 56.8
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 3.7e-58 230.3 262 51.1
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 3.7e-58 230.3 194 61.9
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 4.9e-58 229.9 262 51.1
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 8.3e-58 229.2 206 60.2
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 1.8e-57 228.0 256 51.2
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 4.1e-57 226.9 214 58.4
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 7.0e-57 226.1 208 57.7
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 7.0e-57 226.1 191 57.1
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 9.2e-57 225.7 221 53.4
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 9.2e-57 225.7 216 57.4
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.6e-56 224.9 210 56.7
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 2.0e-56 224.6 211 57.3
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 2.0e-56 224.6 239 53.6
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 7.8e-56 222.6 231 55.4
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 7.8e-56 222.6 199 58.8
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 1.3e-55 221.9 211 58.3
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.7e-55 221.5 211 58.3
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.7e-55 221.5 231 55.0
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.7e-55 221.5 219 52.5
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 3.0e-55 220.7 214 55.1
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 3.0e-55 220.7 224 54.9
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 3.9e-55 220.3 246 50.4
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 3.9e-55 220.3 234 54.7
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 3.9e-55 220.3 231 55.0
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 5.0e-55 219.9 192 58.9
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 2.5e-54 217.6 245 50.2
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 3.3e-54 217.2 199 58.8
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.2e-53 215.3 259 48.3
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 1.2e-53 215.3 201 57.2
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 1.2e-53 215.3 245 49.8
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 1.6e-53 214.9 227 52.9
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 2.8e-53 214.2 282 45.4
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 2.8e-53 214.2 216 54.2
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 6.2e-53 213.0 191 57.6
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 8.0e-53 212.6 238 53.4
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 1.1e-52 212.2 199 56.3
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 1.4e-52 211.8 238 50.0
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 1.4e-52 211.8 199 56.3
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 4.0e-52 210.3 204 53.4
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 5.2e-52 209.9 210 52.4
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 6.8e-52 209.5 198 58.1
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 9.8e-51 205.7 234 51.3
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 9.8e-51 205.7 266 44.7
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 2.2e-50 204.5 188 55.9
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 2.9e-50 204.1 216 52.3
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 3.7e-50 203.8 280 45.4
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 8.3e-50 202.6 205 52.2
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 1.4e-49 201.8 194 53.6
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 1.9e-49 201.4 166 63.3
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 1.9e-49 201.4 177 55.4
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 1.9e-49 201.4 299 40.8
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 2.4e-49 201.1 169 54.4
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 2.4e-49 201.1 173 54.3
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 4.1e-49 200.3 169 54.4
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 4.1e-49 200.3 173 54.9
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 5.4e-49 199.9 169 53.8
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 9.2e-49 199.1 209 50.2
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 1.6e-48 198.4 169 53.8
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 1.6e-48 198.4 246 48.4
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 1.6e-48 198.4 185 53.5
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.1e-48 198.0 177 54.8
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 2.1e-48 198.0 206 51.0
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 2.7e-48 197.6 209 46.9
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 3.5e-48 197.2 209 51.2
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 4.6e-48 196.8 287 41.5
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 6.0e-48 196.4 219 48.9
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 7.8e-48 196.1 174 55.2
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 1.7e-47 194.9 202 47.5
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 1.7e-47 194.9 173 54.9
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.0e-47 194.1 208 49.5
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 6.6e-47 193.0 203 49.3
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 6.6e-47 193.0 201 50.7
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.1e-46 192.2 203 50.2
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.9e-46 191.4 199 52.8
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 1.9e-46 191.4 201 49.3
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 3.3e-46 190.7 308 41.2
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 5.6e-46 189.9 181 51.9
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 1.6e-45 188.3 258 44.2
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 4.0e-44 183.7 229 45.4
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 6.8e-44 183.0 215 47.0
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 5.8e-43 179.9 167 57.5
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 9.9e-43 179.1 276 42.4
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 2.1e-37 161.4 118 67.8
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 4.4e-35 153.7 161 53.4
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 8.7e-31 139.4 171 43.9
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 2.8e-29 134.4 125 51.2
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 4.0e-28 130.6 126 50.0
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.9e-25 121.7 163 48.5
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 6.6e-23 113.2 206 33.0
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 1.9e-22 111.7 109 50.5
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 8.1e-21 106.3 88 54.5
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 1.8e-20 105.1 185 33.5
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 2.4e-12 78.2 185 30.3
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 5.3e-12 77.0 59 54.2
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.2e-08 65.9 125 39.2
Cc05_g15380 Coffea canephora HOM05D006765 ORTHO05D008554 4.6e-08 63.9 95 42.1
MSTRG.15811 Avicennia marina HOM05D006765 ORTHO05D008554 5.6e-06 57.0 100 39.0


User provided reference genes

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