Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g15230 Coffea canephora HOM05D003572 ORTHO05D004118 1.4e-34 149.1 74 100.0
Dinv10359 Davidia involucrata HOM05D003572 ORTHO05D004118 9.6e-12 73.2 69 59.4
Dinv40882 Davidia involucrata HOM05D003572 ORTHO05D004118 2.8e-11 71.6 66 60.6
TAR629G3234 Trochodendron aralioides HOM05D003572 ORTHO05D004118 1.4e-10 69.3 66 59.1
Hma1.2p1_0193F.1_g083875 Hydrangea macrophylla HOM05D003572 ORTHO05D004118 4.0e-10 67.8 76 53.9
GSVIVG01014734001 Vitis vinifera HOM05D003572 ORTHO05D004118 4.0e-10 67.8 39 82.1
Actinidia30380 Actinidia chinensis HOM05D003572 ORTHO05D004118 3.4e-09 64.7 66 57.6
ClCG09G021500 Citrullus lanatus HOM05D003572 ORTHO05D004118 4.5e-09 64.3 66 60.6
Gohir.D01G077900 Gossypium hirsutum HOM05D003572 ORTHO05D004118 4.9e-08 60.8 72 55.6
Gorai.002G102500 Gossypium raimondii HOM05D003572 ORTHO05D004118 4.9e-08 60.8 72 55.6
Actinidia10566 Actinidia chinensis HOM05D003572 ORTHO05D004118 3.2e-07 58.2 68 52.9
Sed0013758 Sechium edule HOM05D003572 ORTHO05D004118 3.2e-07 58.2 38 76.3
Hund01872 Selenicereus undatus HOM05D003572 ORTHO05D004118 3.2e-07 58.2 66 53.0
CDE10G0278 Ceratophyllum demersum HOM05D003572 ORTHO05D004118 4.2e-07 57.8 58 50.0
CSS0008919 Camellia sinensis var. sinensis HOM05D003572 ORTHO05D004118 5.5e-07 57.4 37 78.4
CSS0029598 Camellia sinensis var. sinensis HOM05D003572 ORTHO05D004118 5.5e-07 57.4 37 78.4
Nitab4.5_0005478g0010 Nicotiana tabacum HOM05D003572 ORTHO05D004118 5.5e-07 57.4 57 54.4
CAN.G623.35 Capsicum annuum HOM05D003572 ORTHO05D004118 7.1e-07 57.0 69 50.7
COL.COLO4_07733 Corchorus olitorius HOM05D003572 ORTHO05D004118 9.3e-07 56.6 72 51.4
Duzib268G0100 Durio zibethinus HOM05D003572 ORTHO05D004118 9.3e-07 56.6 69 55.1
Sc03g0011580 Simmondsia chinensis HOM05D003572 ORTHO05D004118 2.7e-06 55.1 56 51.8
Duzib170G0647 Durio zibethinus HOM05D003572 ORTHO05D004118 3.5e-06 54.7 72 52.8
Sed0025611 Sechium edule HOM05D003572 ORTHO05D004118 3.5e-06 54.7 66 56.1
Manes.03G143300 Manihot esculenta HOM05D003572 ORTHO05D004118 4.6e-06 54.3 68 45.6
Sopen07g033980 Solanum pennellii HOM05D003572 ORTHO05D004118 4.6e-06 54.3 67 50.7
TWI38G2019 Tripterygium wilfordii HOM05D003572 ORTHO05D004118 4.6e-06 54.3 66 53.0
Nitab4.5_0000152g0390 Nicotiana tabacum HOM05D003572 ORTHO05D004118 6.0e-06 53.9 33 72.7
Nitab4.5_0010643g0010 Nicotiana tabacum HOM05D003572 ORTHO05D004118 6.0e-06 53.9 33 72.7
PGSC0003DMG400022268 Solanum tuberosum HOM05D003572 ORTHO05D004118 6.0e-06 53.9 67 49.3
Nn1g07756 Nelumbo nucifera HOM05D003572 ORTHO05D004118 7.9e-06 53.5 74 50.0
Peaxi162Scf00139g01024 Petunia axillaris HOM05D003572 ORTHO05D004118 7.9e-06 53.5 66 48.5
TAR627G0575 Trochodendron aralioides HOM05D003572 ORTHO05D004118 7.9e-06 53.5 39 64.1


User provided reference genes

Program Settings