Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g14730 Coffea canephora HOM05D007725 ORTHO05D009774 8.4e-170 600.9 468 100.0
Peaxi162Scf00955g00014 Petunia axillaris HOM05D007725 ORTHO05D009774 5.9e-91 339.0 463 65.7
Lj1P886T16 Lonicera japonica HOM05D007725 ORTHO05D009774 2.9e-90 336.7 464 70.9
Nitab4.5_0002517g0030 Nicotiana tabacum HOM05D007725 ORTHO05D009774 1.6e-88 330.9 461 64.0
PGSC0003DMG402029798 Solanum tuberosum HOM05D007725 ORTHO05D009774 8.3e-85 318.5 460 64.3
Sopen12g007550 Solanum pennellii HOM05D007725 ORTHO05D009774 1.9e-84 317.4 460 63.7
Nitab4.5_0000163g0300 Nicotiana tabacum HOM05D007725 ORTHO05D009774 6.0e-83 312.4 461 67.9
Solyc12g015650.3 Solanum lycopersicum HOM05D007725 ORTHO05D009774 1.7e-82 310.8 460 63.0
CSS0027076 Camellia sinensis var. sinensis HOM05D007725 ORTHO05D009774 3.9e-82 309.7 465 60.4
Dinv10315 Davidia involucrata HOM05D007725 ORTHO05D009774 1.7e-74 284.3 446 70.0
MSTRG.15782 Avicennia marina HOM05D007725 ORTHO05D009774 2.5e-73 280.4 464 63.8
Hma1.2p1_2796F.1_g328670 Hydrangea macrophylla HOM05D007725 ORTHO05D009774 6.2e-72 275.8 468 65.4
TAR624G0507 Trochodendron aralioides HOM05D007725 ORTHO05D009774 6.4e-69 265.8 466 64.4
COL.COLO4_09791 Corchorus olitorius HOM05D007725 ORTHO05D009774 1.2e-67 261.5 454 62.1
Duzib170G0716 Durio zibethinus HOM05D007725 ORTHO05D009774 1.2e-64 251.5 451 55.9
PSO478G1598 Papaver somniferum HOM05D007725 ORTHO05D009774 3.6e-64 250.0 470 63.6
GSVIVG01037784001 Vitis vinifera HOM05D007725 ORTHO05D009774 8.1e-64 248.8 473 57.3
DCAR_022605 Daucus carota HOM05D007725 ORTHO05D009774 6.8e-63 245.7 446 50.9
Nn1g03245 Nelumbo nucifera HOM05D007725 ORTHO05D009774 8.9e-63 245.4 469 56.1
VMungo0540G1375 Vigna mungo HOM05D007725 ORTHO05D009774 1.2e-62 245.0 456 59.0
GSVIVG01037783001 Vitis vinifera HOM05D007725 ORTHO05D009774 1.2e-62 245.0 458 56.6
Migut.M01753 Erythranthe guttata HOM05D007725 ORTHO05D009774 2.0e-62 244.2 456 63.2
Haze_09790 Corylus avellana HOM05D007725 ORTHO05D009774 9.3e-60 235.3 474 62.2
Glyma.08G326100 Glycine max HOM05D007725 ORTHO05D009774 1.2e-59 235.0 458 58.7
ClCG09G021110 Citrullus lanatus HOM05D007725 ORTHO05D009774 1.3e-58 231.5 454 59.5
Nn1g03425 Nelumbo nucifera HOM05D007725 ORTHO05D009774 1.9e-57 227.6 444 63.5
Cfa020227 Carpinus fangiana HOM05D007725 ORTHO05D009774 2.5e-57 227.3 478 58.2
Gohir.A11G277300 Gossypium hirsutum HOM05D007725 ORTHO05D009774 2.5e-57 227.3 449 49.4
HanXRQChr11g0333971 Helianthus annuus HOM05D007725 ORTHO05D009774 3.3e-57 226.9 459 47.3
MELO3C024908.2 Cucumis melo HOM05D007725 ORTHO05D009774 4.3e-57 226.5 433 60.0
CsaV3_7G018510 Cucumis sativus L. HOM05D007725 ORTHO05D009774 4.3e-57 226.5 454 59.7
Oeu005490.1 Olea europaea HOM05D007725 ORTHO05D009774 5.6e-57 226.1 206 56.8
Gorai.007G311000 Gossypium raimondii HOM05D007725 ORTHO05D009774 3.6e-56 223.4 450 45.8
SalBow8G2031 Salvia bowleyana HOM05D007725 ORTHO05D009774 9.0e-55 218.8 427 65.3
Ciclev10008214m.g Citrus clementina HOM05D007725 ORTHO05D009774 3.8e-53 213.4 456 56.4
Cpa.g.sc12.189 Carica papaya HOM05D007725 ORTHO05D009774 6.4e-53 212.6 454 58.6
Nn1g07446 Nelumbo nucifera HOM05D007725 ORTHO05D009774 1.9e-52 211.1 347 57.1
AL3G33870 Arabidopsis lyrata HOM05D007725 ORTHO05D009774 2.4e-52 210.7 469 56.7
Gohir.D11G287700 Gossypium hirsutum HOM05D007725 ORTHO05D009774 5.4e-52 209.5 331 51.4
Psat5g175640 Pisum sativum HOM05D007725 ORTHO05D009774 7.1e-52 209.1 454 59.9
Medtr3g056580 Medicago truncatula HOM05D007725 ORTHO05D009774 1.6e-51 208.0 448 43.3
CARHR095760 Cardamine hirsuta HOM05D007725 ORTHO05D009774 2.1e-51 207.6 457 58.2
Carub.0003s2010 Capsella rubella HOM05D007725 ORTHO05D009774 2.7e-51 207.2 460 58.9
Manes.03G138100 Manihot esculenta HOM05D007725 ORTHO05D009774 6.0e-51 206.1 462 59.5
AT3G20170 Arabidopsis thaliana HOM05D007725 ORTHO05D009774 2.3e-50 204.1 459 57.7
BcaB04g19094 Brassica carinata HOM05D007725 ORTHO05D009774 1.1e-49 201.8 460 58.9
Ca_26464_v3 Cicer arietinum L. HOM05D007725 ORTHO05D009774 5.6e-49 199.5 449 49.7
Aa31LG8G7000 Aethionema arabicum HOM05D007725 ORTHO05D009774 9.6e-49 198.7 460 58.0
C03p50970 Brassica napus HOM05D007725 ORTHO05D009774 1.8e-47 194.5 476 54.6
BolC3t17381H Brassica oleracea HOM05D007725 ORTHO05D009774 1.8e-47 194.5 476 54.8
arahy.Tifrunner.gnm1.ann1.TWJV4J Arachis hypogaea HOM05D007725 ORTHO05D009774 3.1e-47 193.7 438 57.3
BolC5t33143H Brassica oleracea HOM05D007725 ORTHO05D009774 4.0e-47 193.4 458 57.2
C05p44210 Brassica napus HOM05D007725 ORTHO05D009774 5.3e-47 193.0 458 57.2
A03p41610 Brassica napus HOM05D007725 ORTHO05D009774 9.0e-47 192.2 459 56.6
BraA03t13314Z Brassica rapa HOM05D007725 ORTHO05D009774 9.0e-47 192.2 459 56.6
Sed0002917 Sechium edule HOM05D007725 ORTHO05D009774 1.2e-46 191.8 454 54.8
Thhalv10020642m.g Eutrema salsugineum HOM05D007725 ORTHO05D009774 1.5e-46 191.4 474 55.7
SEGI_22467 Sequoiadendron giganteum HOM05D007725 ORTHO05D009774 3.4e-46 190.3 443 59.6
arahy.Tifrunner.gnm1.ann1.LCTM2T Arachis hypogaea HOM05D007725 ORTHO05D009774 4.5e-46 189.9 438 57.5
Sp3g18200 Schrenkiella parvula HOM05D007725 ORTHO05D009774 9.9e-46 188.7 457 56.7
ATR1149G149 Amborella trichopoda HOM05D007725 ORTHO05D009774 2.9e-45 187.2 455 59.3
TPR.G1953 Trifolium pratense HOM05D007725 ORTHO05D009774 2.4e-44 184.1 467 30.6
SGA_v2.0_scaffold168G38532 Striga asiatica HOM05D007725 ORTHO05D009774 4.2e-44 183.3 333 37.5
A05p28800 Brassica napus HOM05D007725 ORTHO05D009774 7.1e-44 182.6 458 55.5
EL10Ac4g07611 Beta vulgaris HOM05D007725 ORTHO05D009774 1.6e-43 181.4 350 52.9
arahy.Tifrunner.gnm1.ann1.Q8DMES Arachis hypogaea HOM05D007725 ORTHO05D009774 4.6e-43 179.9 438 57.8
QL08p005480 Quercus lobata HOM05D007725 ORTHO05D009774 1.5e-41 174.9 460 50.9
PGR031G2940 Punica granatum HOM05D007725 ORTHO05D009774 8.1e-40 169.1 342 50.3
AUR62040655 Chenopodium quinoa HOM05D007725 ORTHO05D009774 3.2e-36 157.1 450 56.2
AUR62017062 Chenopodium quinoa HOM05D007725 ORTHO05D009774 2.7e-35 154.1 335 50.7
Phvul.006G053700 Phaseolus vulgaris HOM05D007725 ORTHO05D009774 6.0e-35 152.9 359 61.3
Lj6g0016094 Lotus japonicus HOM05D007725 ORTHO05D009774 3.9e-34 150.2 451 51.2
Lj2g0017250 Lotus japonicus HOM05D007725 ORTHO05D009774 1.5e-33 148.3 352 29.8
Lj6g0003901 Lotus japonicus HOM05D007725 ORTHO05D009774 1.3e-32 145.2 344 46.2
BraA05t21757Z Brassica rapa HOM05D007725 ORTHO05D009774 4.8e-32 143.3 199 43.2
Thecc.07G022000 Theobroma cacao HOM05D007725 ORTHO05D009774 1.8e-31 141.4 173 44.5
Lj6g0024671 Lotus japonicus HOM05D007725 ORTHO05D009774 3.1e-31 140.6 454 50.0
HPP92_006089 Vanilla planifolia HOM05D007725 ORTHO05D009774 2.6e-22 110.9 455 46.2
COL.COLO4_09793 Corchorus olitorius HOM05D007725 ORTHO05D009774 4.5e-22 110.2 192 38.5
BcaC01g03576 Brassica carinata HOM05D007725 ORTHO05D009774 2.3e-18 97.8 159 37.7
TPR.G1910 Trifolium pratense HOM05D007725 ORTHO05D009774 1.8e-10 71.6 73 52.1


User provided reference genes

Program Settings