Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 7.1e-108 394.0 212 100.0
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 2.9e-45 186.0 216 57.9
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.1e-44 184.1 218 54.1
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 1.4e-44 183.7 204 58.8
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 7.9e-43 177.9 214 54.2
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 8.8e-42 174.5 217 53.0
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.3e-41 172.6 213 53.5
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 9.1e-39 164.5 229 49.3
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 2.0e-38 163.3 220 51.4
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 1.0e-37 161.0 212 50.9
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.7e-37 160.2 214 51.4
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 2.9e-37 159.5 216 48.6
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 6.5e-37 158.3 225 47.1
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.1e-36 157.5 224 48.2
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.1e-36 157.5 224 48.2
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.9e-36 156.8 216 50.0
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 1.9e-36 156.8 224 47.8
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.9e-36 156.8 218 48.2
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 4.2e-36 155.6 218 50.9
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 4.2e-36 155.6 215 51.2
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 7.2e-36 154.8 214 49.5
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 1.6e-35 153.7 214 50.5
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 2.1e-35 153.3 222 50.0
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 2.1e-35 153.3 220 50.5
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 4.7e-35 152.1 222 48.6
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 8.0e-35 151.4 216 49.1
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.0e-34 151.0 230 47.4
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 1.8e-34 150.2 210 51.0
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.8e-34 150.2 212 50.0
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.0e-34 149.4 224 47.8
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.0e-34 149.4 224 47.8
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 4.0e-34 149.1 218 49.5
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.8e-34 147.9 213 47.4
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 2.6e-33 146.4 216 52.3
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 4.4e-33 145.6 218 48.6
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 9.7e-33 144.4 220 50.0
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 9.7e-33 144.4 218 48.6
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 1.3e-32 144.1 219 47.9
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 1.7e-32 143.7 227 45.4
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.8e-31 140.2 217 46.1
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 5.3e-31 138.7 201 49.3
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 9.1e-31 137.9 216 45.4
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.6e-30 137.1 219 43.8
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 3.5e-30 136.0 197 49.7
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 3.5e-30 136.0 209 47.4
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 4.5e-30 135.6 203 47.3
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 1.3e-29 134.0 226 45.6
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 5.0e-29 132.1 206 47.1
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 1.1e-28 131.0 215 41.9
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 3.2e-28 129.4 209 43.5
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 3.2e-28 129.4 205 44.4
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 7.2e-28 128.3 212 42.9
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.2e-27 127.5 198 42.9
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 2.1e-27 126.7 217 41.0
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 2.1e-27 126.7 215 45.6
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 2.1e-27 126.7 199 43.7
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 2.1e-27 126.7 245 42.4
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 2.1e-27 126.7 209 43.5
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 4.7e-27 125.6 201 45.8
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 8.0e-27 124.8 200 48.0
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 8.0e-27 124.8 197 43.7
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 8.0e-27 124.8 210 46.2
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.8e-26 123.6 219 42.5
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 1.8e-26 123.6 204 45.6
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 6.8e-26 121.7 204 43.1
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.2e-25 120.9 159 50.3
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 2.6e-25 119.8 203 41.4
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 7.5e-25 118.2 200 41.0
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 7.5e-25 118.2 199 46.7
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 3.7e-24 115.9 201 44.3
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 3.7e-24 115.9 202 43.1
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 6.3e-24 115.2 199 41.2
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 8.3e-24 114.8 210 39.0
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 2.0e-22 110.2 187 44.4
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 2.7e-22 109.8 197 43.7
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 4.5e-22 109.0 188 41.5
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.7e-21 107.1 197 40.1
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 3.8e-21 105.9 165 47.3
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 3.8e-21 105.9 232 37.1
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.1e-20 104.4 216 38.0
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 2.5e-20 103.2 214 39.3
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 4.2e-20 102.4 197 39.1
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 3.6e-19 99.4 197 38.6
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 4.7e-19 99.0 207 41.5
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 6.8e-18 95.1 210 36.7
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 6.8e-18 95.1 199 38.2
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 1.3e-16 90.9 161 46.6
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.7e-16 90.5 197 41.1
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 3.7e-16 89.4 110 51.8
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 8.3e-16 88.2 116 49.1
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 6.6e-13 78.6 214 33.6
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 8.0e-11 71.6 166 34.9
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.3e-10 70.1 185 35.7
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 1.4e-07 60.8 159 32.1
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 3.5e-06 56.2 63 47.6
ATR0317G118 Amborella trichopoda HOM05D007542 ORTHO05D009519 5.9e-06 55.5 63 46.0


User provided reference genes

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