Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 2.3e-191 672.2 356 100.0
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.4e-156 555.8 356 81.7
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 6.8e-156 554.3 356 81.5
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 1.1e-153 547.0 356 78.4
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 1.9e-153 546.2 357 80.1
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 4.2e-153 545.0 356 79.8
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 5.4e-153 544.7 356 78.9
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 7.1e-153 544.3 351 81.2
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 2.1e-152 542.7 361 79.2
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 2.7e-152 542.3 351 80.1
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 4.6e-152 541.6 356 79.5
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 1.7e-151 539.7 356 79.5
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 2.3e-151 539.3 356 79.2
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 8.7e-151 537.3 358 77.1
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 1.1e-150 537.0 356 78.9
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.6e-149 531.9 362 76.8
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 1.1e-148 530.4 351 79.2
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 4.4e-147 525.0 358 77.4
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 1.7e-146 523.1 356 76.7
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.7e-146 523.1 360 76.4
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.7e-146 523.1 362 76.0
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 2.2e-146 522.7 356 75.8
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.2e-146 522.7 362 76.5
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 1.4e-145 520.0 362 76.2
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 2.4e-145 519.2 348 78.4
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 5.4e-145 518.1 356 74.4
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 5.4e-145 518.1 359 76.0
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 7.1e-145 517.7 366 74.6
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 9.3e-145 517.3 356 75.6
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.2e-144 516.9 362 76.0
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 1.2e-144 516.9 353 77.1
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 2.1e-144 516.2 356 77.0
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 2.1e-144 516.2 333 79.3
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 2.7e-144 515.8 333 79.6
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 4.6e-144 515.0 362 76.0
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 6.0e-144 514.6 372 74.5
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 1.0e-143 513.8 340 79.1
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.7e-143 513.1 343 77.8
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 2.3e-143 512.7 351 77.2
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 3.0e-143 512.3 342 76.9
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 1.9e-142 509.6 358 76.0
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 2.5e-142 509.2 363 73.6
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 2.5e-142 509.2 332 80.1
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 5.6e-142 508.1 343 77.6
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 5.6e-142 508.1 344 77.9
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 5.6e-142 508.1 344 77.9
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 7.3e-142 507.7 360 75.3
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.6e-141 506.5 342 76.6
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 4.8e-141 505.0 333 78.1
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 6.2e-141 504.6 343 76.1
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 1.4e-140 503.4 342 75.7
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 1.4e-140 503.4 362 74.0
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 4.0e-140 501.9 342 76.0
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.0e-139 499.6 356 73.6
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 2.0e-139 499.6 372 72.6
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 5.8e-139 498.0 385 70.6
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 7.6e-139 497.7 333 76.9
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 9.9e-139 497.3 363 73.8
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 6.4e-138 494.6 358 73.2
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 8.4e-138 494.2 361 75.3
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 1.1e-137 493.8 333 76.3
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.9e-137 493.0 358 72.9
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 4.2e-137 491.9 356 74.2
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 7.1e-137 491.1 360 71.7
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 9.3e-137 490.7 356 72.2
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 4.6e-136 488.4 340 75.6
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 7.9e-136 487.6 333 76.3
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 1.0e-135 487.3 338 76.6
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 1.3e-135 486.9 360 73.3
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 2.3e-135 486.1 341 73.9
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 3.0e-135 485.7 333 76.0
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 3.0e-135 485.7 333 76.0
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 3.0e-135 485.7 333 76.0
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 1.1e-134 483.8 333 75.7
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 1.1e-134 483.8 342 74.6
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 1.1e-134 483.8 360 73.3
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 1.9e-134 483.0 334 75.7
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 2.5e-134 482.6 360 71.9
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 7.4e-134 481.1 334 75.1
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 9.6e-134 480.7 342 73.7
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 1.2e-131 473.8 360 69.4
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 3.4e-131 472.2 348 71.6
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 8.4e-130 467.6 330 72.1
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.9e-129 466.5 334 73.7
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 2.7e-128 462.6 299 81.6
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 1.8e-127 459.9 350 71.1
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.8e-124 449.9 358 69.6
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 5.1e-119 431.8 270 81.9
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 2.5e-118 429.5 270 81.9
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 2.6e-107 392.9 332 60.8
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.9e-105 386.7 356 61.0
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 3.2e-105 386.0 332 58.7
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.2e-104 384.0 273 74.4
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 2.0e-102 376.7 331 59.8
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 1.1e-97 360.9 265 72.1
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 2.7e-91 339.7 290 65.2
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 1.4e-79 300.8 242 64.9
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 1.2e-75 287.7 352 48.0
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 3.8e-74 282.7 273 57.5
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 9.8e-70 268.1 229 64.6
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 9.8e-70 268.1 331 47.4
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 3.6e-64 249.6 284 51.1
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.7e-64 249.2 151 82.1
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.8e-63 247.3 182 69.8
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 5.2e-63 245.7 360 46.9
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.3e-61 241.1 332 43.4
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.3e-61 241.1 191 66.5
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.0e-54 217.2 185 64.9
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 1.1e-47 194.9 187 55.6
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.1e-47 194.9 140 71.4
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.2e-44 183.3 154 65.6
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 1.2e-40 171.4 265 42.3
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 6.2e-40 169.1 114 72.8
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 4.4e-38 162.9 91 89.0
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 6.9e-31 139.0 138 60.9
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 8.7e-26 122.1 131 51.9
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 2.1e-24 117.5 66 87.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 1.3e-21 108.2 57 93.0
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 5.6e-17 92.8 89 55.1
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 4.9e-13 79.7 43 90.7
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 1.9e-12 77.8 46 82.6
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 3.4e-06 57.0 50 60.0


User provided reference genes

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