Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 3.0e-108 395.2 203 100.0
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 6.8e-76 287.7 203 76.8
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 7.6e-43 177.9 200 47.5
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 1.4e-41 173.7 203 47.3
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 1.6e-37 160.2 203 41.9
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 2.0e-35 153.3 199 45.2
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 1.3e-34 150.6 203 43.8
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 1.7e-34 150.2 203 43.3
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 4.9e-34 148.7 198 43.9
Nitab4.5_0000639g0010 Nicotiana tabacum HOM05D008666 ORTHO05D009871 2.7e-32 142.9 198 43.4
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 7.4e-30 134.8 198 39.4
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 5.5e-25 118.6 210 34.8
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 7.9e-24 114.8 193 39.4
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 7.9e-24 114.8 197 35.0
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 1.3e-23 114.0 198 37.4
PGSC0003DMG400008566 Solanum tuberosum HOM05D008666 ORTHO05D009871 1.3e-23 114.0 193 36.3
Sopen12g006860 Solanum pennellii HOM05D008666 ORTHO05D009871 3.1e-20 102.8 193 35.2
Solyc12g013520.3 Solanum lycopersicum HOM05D008666 ORTHO05D009871 3.4e-19 99.4 193 34.2
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 4.5e-19 99.0 197 31.0
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 2.5e-17 93.2 214 31.3
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 9.4e-17 91.3 199 31.7
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 9.4e-17 91.3 208 30.3
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 2.1e-16 90.1 195 34.4
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 7.9e-16 88.2 197 31.0
Lsat_1_v5_gn_9_95760 Lactuca sativa HOM05D008666 ORTHO05D009871 1.1e-14 84.3 120 39.2
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 3.3e-14 82.8 195 31.3
Sopen12g006870 Solanum pennellii HOM05D008666 ORTHO05D009871 3.3e-14 82.8 138 38.4
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 1.7e-13 80.5 213 28.2
Rhsim04G0017800 Rhododendron simsii HOM05D008666 ORTHO05D009871 2.2e-13 80.1 212 32.5
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 3.7e-13 79.3 153 32.7
Cpa.g.sc80.110 Carica papaya HOM05D048510 ORTHO05D009871 1.8e-12 77.0 220 28.2
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 2.4e-12 76.6 82 43.9
Nitab4.5_0000662g0020 Nicotiana tabacum HOM05D008666 ORTHO05D009871 3.1e-12 76.3 98 43.9
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 6.9e-12 75.1 235 28.1
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 6.9e-12 75.1 235 28.1
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 2.0e-11 73.6 106 33.0
TAR599G0004 Trochodendron aralioides HOM05D008666 ORTHO05D009871 2.0e-11 73.6 92 41.3
Nitab4.5_0005141g0060 Nicotiana tabacum HOM05D008666 ORTHO05D009871 2.6e-11 73.2 91 41.8
vmacro09555 Vaccinium macrocarpon HOM05D008666 ORTHO05D009871 2.6e-11 73.2 185 27.6
AUR62026950 Chenopodium quinoa HOM05D014664 ORTHO05D009871 4.5e-11 72.4 196 26.0
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 5.9e-11 72.0 110 42.7
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 5.0e-10 68.9 92 37.0
Atru.chr2.2827 Acer truncatum HOM05D038199 ORTHO05D009871 6.5e-10 68.6 223 28.7
Oeu008031.1 Olea europaea HOM05D052362 ORTHO05D009871 8.5e-10 68.2 93 40.9
Ah.10g037450 Amaranthus hybridus HOM05D014664 ORTHO05D009871 1.1e-09 67.8 197 24.4
EL10Ac5g12049 Beta vulgaris HOM05D014664 ORTHO05D009871 1.4e-09 67.4 198 26.8
Sc11g0008030 Simmondsia chinensis HOM05D014664 ORTHO05D009871 1.9e-09 67.0 212 28.8
ECA240G0223 Erigeron canadensis HOM05D008666 ORTHO05D009871 3.2e-09 66.2 111 31.5
Nn1g06738 Nelumbo nucifera HOM05D008666 ORTHO05D009871 9.4e-09 64.7 92 38.0
Manes.01G178300 Manihot esculenta HOM05D008666 ORTHO05D009871 2.1e-08 63.5 109 34.9
AUR62043278 Chenopodium quinoa HOM05D014664 ORTHO05D009871 3.6e-08 62.8 200 27.0
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 3.6e-08 62.8 92 41.3
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 4.7e-08 62.4 91 40.7
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 6.1e-08 62.0 227 26.4
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.0e-07 61.2 124 33.1
ECA240G3731 Erigeron canadensis HOM05D001107 ORTHO05D009871 1.4e-07 60.8 154 25.3
CSS0038280 Camellia sinensis var. sinensis HOM05D010293 ORTHO05D009871 1.8e-07 60.5 198 25.3
QL08p018585 Quercus lobata HOM05D010293 ORTHO05D009871 5.1e-07 58.9 283 21.6
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 1.1e-06 57.8 119 31.1
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 2.6e-06 56.6 120 33.3
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 2.6e-06 56.6 121 28.9
Rhsim04G0017600 Rhododendron simsii HOM05D008666 ORTHO05D009871 5.7e-06 55.5 83 38.6
CAN.G1320.12 Capsicum annuum HOM05D008666 ORTHO05D009871 7.4e-06 55.1 93 35.5
RcHm_v2.0_Chr5g0035311 Rosa chinensis HOM05D010293 ORTHO05D009871 7.4e-06 55.1 115 32.2


User provided reference genes

Program Settings