Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 4.8e-137 491.1 238 100.0
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 9.7e-106 387.1 230 80.0
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 6.9e-104 380.9 214 83.2
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.0e-103 379.4 214 84.1
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 1.9e-101 372.9 214 81.3
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 2.5e-101 372.5 214 79.9
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 4.2e-101 371.7 214 81.8
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 4.2e-101 371.7 214 81.8
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 6.1e-100 367.9 214 78.0
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.0e-99 367.1 214 77.6
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.4e-99 366.7 214 78.0
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 3.0e-99 365.5 214 77.6
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 8.8e-99 364.0 214 78.0
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 1.1e-98 363.6 214 77.1
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 4.4e-98 361.7 214 76.6
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 9.7e-98 360.5 214 76.6
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.7e-97 359.8 214 77.1
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 1.7e-97 359.8 214 78.5
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.8e-97 359.0 214 75.7
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 4.8e-97 358.2 214 76.2
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 6.3e-97 357.8 214 75.2
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 8.2e-97 357.5 215 75.3
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 1.4e-96 356.7 214 75.2
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 1.8e-96 356.3 214 75.7
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.8e-96 356.3 214 76.6
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 4.1e-96 355.1 197 81.2
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 4.1e-96 355.1 214 74.8
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 5.3e-96 354.8 214 75.2
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.0e-95 352.8 215 75.8
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 2.6e-95 352.4 214 74.3
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 3.4e-95 352.1 214 74.8
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 4.5e-95 351.7 214 74.3
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.0e-94 350.5 243 67.5
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.7e-94 349.7 207 76.3
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 2.2e-94 349.4 207 77.8
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.9e-94 349.0 207 75.8
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 8.5e-94 347.4 207 75.8
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 8.5e-94 347.4 214 73.8
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.1e-93 347.1 214 72.9
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.1e-93 347.1 207 75.4
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.4e-93 346.7 214 72.4
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.5e-93 345.9 214 72.4
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.5e-93 345.9 214 72.9
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 4.2e-93 345.1 214 72.4
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 5.5e-93 344.7 214 73.4
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 5.5e-93 344.7 214 73.4
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 9.4e-93 344.0 214 73.4
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 9.4e-93 344.0 194 84.0
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.2e-92 343.6 214 72.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 2.7e-92 342.4 214 71.5
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 3.6e-92 342.0 211 72.5
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 4.7e-92 341.7 214 71.5
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 4.7e-92 341.7 214 70.1
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 6.1e-92 341.3 214 72.4
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 6.1e-92 341.3 214 71.5
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 8.0e-92 340.9 214 71.0
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 8.0e-92 340.9 194 83.0
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.0e-91 340.5 214 71.0
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.8e-91 339.7 214 71.0
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.8e-91 339.7 207 72.9
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 3.0e-91 339.0 214 71.0
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 6.7e-91 337.8 207 71.0
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 8.8e-91 337.4 207 72.5
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.1e-90 337.0 214 70.1
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 1.1e-90 337.0 214 70.1
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.5e-90 336.7 214 72.9
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 1.3e-89 333.6 207 70.5
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.7e-89 333.2 214 69.6
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 2.2e-89 332.8 214 70.6
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 3.7e-89 332.0 207 71.0
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 8.2e-89 330.9 214 71.5
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 5.3e-88 328.2 214 69.2
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 5.3e-88 328.2 205 71.7
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 7.7e-87 324.3 215 68.4
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 1.7e-86 323.2 208 69.2
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 5.0e-86 321.6 208 68.3
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 1.0e-83 313.9 208 67.3
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 2.3e-83 312.8 221 67.9
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 5.2e-83 311.6 196 71.9
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 6.7e-83 311.2 214 67.3
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 5.7e-82 308.1 245 64.5
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.6e-79 300.1 196 67.3
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.9e-79 298.1 207 67.6
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.3e-78 297.0 207 67.1
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.7e-78 296.6 212 62.7
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 1.1e-77 293.9 229 60.3
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 4.2e-77 292.0 240 58.3
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 8.0e-76 287.7 214 65.4
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 8.8e-75 284.3 196 63.3
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 1.4e-72 276.9 197 62.4
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 3.8e-70 268.9 197 61.9
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 5.4e-64 248.4 161 70.2
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 2.3e-46 189.9 103 80.6
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 5.6e-45 185.3 103 80.6
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.1e-40 171.0 146 58.9
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 4.6e-39 165.6 157 56.1
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 4.6e-39 165.6 157 56.1
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 2.3e-38 163.3 146 57.5
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.5e-37 160.6 90 78.9
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 4.3e-37 159.1 172 41.3
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 4.4e-34 149.1 168 37.5
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 5.8e-34 148.7 184 40.8
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 9.2e-32 141.4 168 38.7
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 9.6e-29 131.3 214 39.7
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 8.7e-14 81.6 78 43.6
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 4.8e-12 75.9 49 67.3
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.4e-11 73.6 50 64.0
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.1e-11 73.2 49 65.3
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 6.9e-11 72.0 45 73.3
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.2e-08 63.2 85 44.7
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 6.0e-07 58.9 47 57.4


User provided reference genes

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