Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 4.7e-117 424.5 203 100.0
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.2e-96 356.7 204 80.4
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 1.6e-96 356.3 206 82.5
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 2.0e-96 355.9 206 82.0
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 2.0e-96 355.9 205 81.0
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 4.5e-96 354.8 206 81.6
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 1.0e-95 353.6 203 79.8
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.9e-95 352.1 204 79.4
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 6.6e-95 350.9 204 79.9
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 6.6e-95 350.9 204 79.4
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 8.6e-95 350.5 206 77.7
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 8.6e-95 350.5 204 78.9
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 1.9e-94 349.4 206 80.1
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 4.2e-94 348.2 203 78.3
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 4.2e-94 348.2 204 78.9
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 9.5e-94 347.1 204 79.4
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 1.2e-93 346.7 203 77.8
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.6e-93 346.3 205 76.6
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.6e-93 346.3 203 76.8
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 2.8e-93 345.5 194 81.4
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 3.6e-93 345.1 200 80.0
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 6.1e-93 344.4 206 78.2
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.0e-93 344.0 204 78.4
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 1.4e-92 343.2 204 77.5
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 2.3e-92 342.4 205 77.1
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 3.0e-92 342.0 204 76.0
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 3.0e-92 342.0 205 76.6
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 3.0e-92 342.0 205 76.1
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 3.0e-92 342.0 204 77.0
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 4.0e-92 341.7 194 82.5
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 8.9e-92 340.5 204 75.5
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.2e-91 340.1 206 76.2
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 2.0e-91 339.3 203 76.4
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 2.0e-91 339.3 202 77.2
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 2.6e-91 339.0 199 78.9
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 2.6e-91 339.0 191 81.2
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 2.6e-91 339.0 203 77.3
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 3.4e-91 338.6 205 75.6
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 4.4e-91 338.2 204 77.0
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 5.7e-91 337.8 203 75.9
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 7.5e-91 337.4 204 74.5
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 7.5e-91 337.4 231 71.9
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.7e-90 336.3 203 74.4
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 2.2e-90 335.9 208 73.1
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 4.9e-90 334.7 193 80.3
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 8.3e-90 334.0 204 76.5
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 1.1e-89 333.6 193 79.3
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 4.1e-89 331.6 206 76.2
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 5.4e-89 331.3 202 74.3
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 7.0e-89 330.9 207 72.9
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 7.0e-89 330.9 204 72.5
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 9.2e-89 330.5 198 78.3
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.6e-88 329.7 205 74.6
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 2.7e-88 328.9 191 77.5
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 3.5e-88 328.6 202 73.3
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.5e-88 328.6 198 77.8
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 5.9e-88 327.8 203 74.4
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 7.8e-88 327.4 204 74.5
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 1.7e-87 326.2 193 76.2
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.5e-86 323.2 204 73.0
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 4.3e-86 321.6 204 72.5
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.6e-85 319.7 204 72.5
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.1e-85 319.3 209 72.7
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 2.8e-85 318.9 203 72.9
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 6.1e-85 317.8 205 68.8
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 6.1e-85 317.8 205 70.7
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 8.0e-85 317.4 187 74.9
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 8.0e-85 317.4 203 72.4
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 1.0e-84 317.0 204 72.1
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.4e-84 316.6 204 71.6
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.4e-84 316.6 204 71.6
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.4e-84 316.6 204 70.6
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.4e-84 316.6 193 76.7
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 2.3e-84 315.8 204 72.1
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 4.0e-84 315.1 202 71.8
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 6.8e-84 314.3 204 71.1
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 8.9e-84 313.9 203 68.5
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.2e-83 313.5 201 68.2
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.2e-83 313.5 204 70.1
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 3.7e-82 308.5 193 72.0
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 3.7e-82 308.5 198 71.7
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 3.7e-82 308.5 193 71.5
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 4.9e-82 308.1 188 74.5
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 2.4e-81 305.8 204 71.6
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 4.1e-81 305.1 204 69.6
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 7.8e-80 300.8 223 65.5
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 5.0e-79 298.1 183 75.4
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.5e-78 296.6 203 69.0
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 2.3e-76 289.3 275 53.8
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.5e-75 286.6 205 65.4
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 3.4e-75 285.4 179 72.6
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 3.3e-70 268.9 185 68.1
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 6.2e-69 264.6 203 61.6
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.6e-64 250.0 177 66.1
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.7e-56 222.6 213 51.6
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 9.9e-51 204.1 117 80.3
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 2.7e-48 196.1 169 49.7
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 5.6e-46 188.3 106 79.2
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.5e-43 180.3 173 46.8
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 9.9e-43 177.6 174 47.7
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 2.1e-37 159.8 156 46.8
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 7.1e-33 144.8 176 37.5
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 1.9e-30 136.7 138 52.9
Sabra11G0102900 Salix brachista HOM05D006845 ORTHO05D348942 1.5e-06 57.4 36 61.1


User provided reference genes

Program Settings