Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 2.3e-112 409.1 229 100.0
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 1.1e-42 177.6 226 58.0
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 2.9e-38 162.9 227 46.3
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 1.4e-37 160.6 227 52.9
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 1.0e-35 154.5 223 54.7
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 2.8e-33 146.4 230 45.7
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 4.0e-32 142.5 228 51.8
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 5.8e-31 138.7 218 47.2
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 2.9e-30 136.3 252 44.0
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 2.7e-28 129.8 202 46.0
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 3.9e-27 125.9 240 43.3
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 3.9e-27 125.9 242 45.5
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 5.1e-27 125.6 242 45.0
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 6.6e-27 125.2 250 47.2
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 6.6e-27 125.2 236 43.2
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 6.6e-27 125.2 238 45.8
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.9e-26 123.6 238 46.2
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 1.9e-26 123.6 238 46.2
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 3.3e-26 122.9 237 46.0
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 5.6e-26 122.1 239 43.5
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 9.5e-26 121.3 231 47.2
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 1.2e-25 120.9 241 46.9
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.6e-25 120.6 227 45.8
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 3.6e-25 119.4 247 45.3
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 4.7e-25 119.0 224 37.9
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 6.2e-25 118.6 238 42.4
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 1.4e-24 117.5 233 45.1
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 5.2e-24 115.5 258 45.3
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 5.2e-24 115.5 235 42.1
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 3.4e-23 112.8 234 43.6
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 5.8e-23 112.1 238 42.4
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 7.6e-23 111.7 230 35.7
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 9.9e-23 111.3 238 41.6
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 2.9e-22 109.8 208 42.8
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 4.9e-22 109.0 208 42.8
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 6.4e-22 108.6 234 41.5
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 8.3e-22 108.2 255 40.4
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 3.2e-21 106.3 238 37.8
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 9.2e-21 104.8 237 39.2
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 2.1e-20 103.6 228 42.1
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 4.6e-20 102.4 212 43.4
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 6.0e-20 102.1 237 40.5
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 1.0e-19 101.3 237 37.6
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.0e-19 101.3 237 37.6
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 1.3e-19 100.9 255 40.4
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 3.9e-19 99.4 235 43.0
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 1.2e-17 94.4 272 38.6
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 1.2e-17 94.4 227 36.1
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 2.1e-17 93.6 246 39.4
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 2.8e-17 93.2 235 39.6
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 3.6e-17 92.8 244 38.5
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 3.6e-17 92.8 256 39.5
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 4.7e-17 92.4 240 38.3
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 4.7e-17 92.4 233 39.1
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 1.1e-16 91.3 84 58.3
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 1.4e-16 90.9 254 37.4
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 2.4e-16 90.1 250 41.6
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 3.1e-16 89.7 172 44.2
SalBow8G3696 Salvia bowleyana HOM05D007784 ORTHO05D008654 5.2e-16 89.0 89 61.8
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 6.8e-16 88.6 220 32.7
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 6.8e-16 88.6 219 39.3
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 2.0e-15 87.0 236 40.7
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 2.6e-15 86.7 265 36.6
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 2.6e-15 86.7 240 40.0
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 1.3e-14 84.3 237 38.8
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 1.3e-14 84.3 191 37.7
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 1.3e-14 84.3 235 41.7
Actinidia12799 Actinidia chinensis HOM05D000223 ORTHO05D000736 3.8e-14 82.8 170 43.5
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 3.2e-13 79.7 238 39.5
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 3.2e-13 79.7 213 34.7
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 3.2e-13 79.7 171 42.1
SGA_v2.0_scaffold73G24239 Striga asiatica HOM05D007784 ORTHO05D008654 9.3e-13 78.2 224 36.2
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 1.6e-12 77.4 224 38.4
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 2.7e-12 76.6 238 37.0
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 7.8e-12 75.1 244 31.6
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 2.3e-11 73.6 201 41.3
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 3.0e-11 73.2 229 37.1
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 1.9e-10 70.5 223 36.8
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.5e-10 70.1 240 29.6
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 3.3e-10 69.7 187 40.6
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 9.6e-10 68.2 258 29.1
unitig_899.g15293 Utricularia gibba HOM05D007784 ORTHO05D008654 1.6e-09 67.4 217 27.2
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 4.8e-09 65.9 233 35.6
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 1.4e-08 64.3 209 32.5
DCAR_019565 Daucus carota HOM05D007784 ORTHO05D008654 1.4e-08 64.3 218 39.4
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 1.8e-08 63.9 209 33.0
Sed0023140 Sechium edule HOM05D007784 ORTHO05D008654 1.8e-08 63.9 53 64.2
Rhsim04G0022200 Rhododendron simsii HOM05D058066 ORTHO05D008654 2.4e-08 63.5 99 36.4
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 4.0e-08 62.8 235 32.8
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 5.3e-08 62.4 225 34.2
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 6.9e-08 62.0 210 36.7
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 6.9e-08 62.0 210 36.7
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 1.2e-07 61.2 240 31.7
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 2.0e-07 60.5 231 38.5
Oeu025364.1 Olea europaea HOM05D007784 ORTHO05D008654 3.4e-07 59.7 133 45.1
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 1.7e-06 57.4 72 50.0


User provided reference genes

Program Settings