Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g11310 Coffea canephora HOM05D013449 ORTHO05D015621 2.3e-201 705.3 344 100.0
Nitab4.5_0002252g0050 Nicotiana tabacum HOM05D013449 ORTHO05D015621 4.7e-93 345.5 278 61.2
Nitab4.5_0000383g0220 Nicotiana tabacum HOM05D013449 ORTHO05D015621 8.0e-93 344.7 295 58.6
PGSC0003DMG400021271 Solanum tuberosum HOM05D013449 ORTHO05D015621 3.0e-92 342.8 280 60.7
Sopen10g003290 Solanum pennellii HOM05D013449 ORTHO05D015621 3.7e-90 335.9 280 59.6
Solyc10g007190.2 Solanum lycopersicum HOM05D013449 ORTHO05D015621 6.3e-90 335.1 280 59.6
Peaxi162Scf00027g00041 Petunia axillaris HOM05D013449 ORTHO05D015621 1.6e-88 330.5 285 58.2
Migut.H01983 Erythranthe guttata HOM05D013449 ORTHO05D015621 6.8e-76 288.5 282 53.9
SGA_v2.0_scaffold130G34308 Striga asiatica HOM05D013449 ORTHO05D015621 1.4e-65 254.2 280 51.4
Oeu051120.1 Olea europaea HOM05D013449 ORTHO05D015621 2.4e-33 147.1 103 68.9
Hma1.2p1_0915F.1_g236340 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.3e-25 118.6 141 45.4
Hma1.2p1_0321F.1_g124180 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.9e-22 110.9 138 41.3
PGR119G1573 Punica granatum HOM05D013449 ORTHO05D015621 1.3e-18 98.2 139 41.7
Rhsim04G0000200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.0e-15 88.6 100 46.0
Rhsim04G0001200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.0e-15 88.6 100 46.0
Dinv10810 Davidia involucrata HOM05D000030 ORTHO05D000009 1.0e-10 72.0 117 35.0
Aqoxy4G02707 Aquilegia oxysepala HOM05D000876 ORTHO05D000285 2.5e-09 67.4 115 33.0
Hma1.2p1_0055F.1_g031250 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 5.1e-07 59.7 112 35.7
Thecc.04G131800 Theobroma cacao HOM05D000030 ORTHO05D010590 6.7e-07 59.3 65 49.2
HPP92_003916 Vanilla planifolia HOM05D000030 ORTHO05D000009 6.7e-07 59.3 69 46.4
Gohir.D01G209133 Gossypium hirsutum HOM05D000030 ORTHO05D000009 8.7e-07 58.9 111 32.4
Hma1.2p1_0485F.1_g163040 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 8.7e-07 58.9 112 34.8
THA.LOC104820158 Tarenaya hassleriana HOM05D000030 ORTHO05D000009 8.7e-07 58.9 91 39.6
Gohir.A03G062801 Gossypium hirsutum HOM05D000030 ORTHO05D000009 1.9e-06 57.8 111 33.3
Gohir.D07G152450 Gossypium hirsutum HOM05D000030 ORTHO05D000009 1.9e-06 57.8 111 32.4
SHI26744 Sapria himalayana HOM05D000030 ORTHO05D000031 1.9e-06 57.8 85 40.0
AUR62021614 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.3e-06 56.6 111 33.3
MELO3C032856.2 Cucumis melo HOM05D000030 ORTHO05D000009 4.3e-06 56.6 95 37.9
ECA232G4030 Erigeron canadensis HOM05D000030 ORTHO05D000009 4.3e-06 56.6 118 33.1
ClCG07G012220 Citrullus lanatus HOM05D000030 ORTHO05D000009 5.7e-06 56.2 103 37.9
Gohir.D04G163966 Gossypium hirsutum HOM05D000030 ORTHO05D000009 5.7e-06 56.2 120 31.7
Gohir.D12G114350 Gossypium hirsutum HOM05D000030 ORTHO05D000009 5.7e-06 56.2 120 31.7
AL1G27390 Arabidopsis lyrata HOM05D000030 ORTHO05D000009 7.4e-06 55.8 84 41.7
Duzib235G0631 Durio zibethinus HOM05D000030 ORTHO05D000009 7.4e-06 55.8 119 33.6
Gorai.013G077200 Gossypium raimondii HOM05D000030 ORTHO05D000009 7.4e-06 55.8 125 32.0
C08p17090 Brassica napus HOM05D000030 ORTHO05D000009 9.6e-06 55.5 112 34.8
BolC8t49335H Brassica oleracea HOM05D000030 ORTHO05D000009 9.6e-06 55.5 112 34.8
Manes.02G223166 Manihot esculenta HOM05D000030 ORTHO05D000009 9.6e-06 55.5 115 32.2
Manes.16G104301 Manihot esculenta HOM05D000030 ORTHO05D000009 9.6e-06 55.5 132 31.1


User provided reference genes

Program Settings