Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g10420 Coffea canephora HOM05D011950 ORTHO05D009674 4.5e-115 417.9 208 100.0
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 2.5e-17 93.2 157 40.1
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 4.8e-16 89.0 194 34.0
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 5.3e-15 85.5 178 38.8
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 2.6e-14 83.2 157 38.2
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 4.5e-14 82.4 176 38.6
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 2.2e-13 80.1 177 37.3
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 3.2e-12 76.3 175 34.9
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 4.2e-12 75.9 176 35.8
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 7.1e-12 75.1 177 35.0
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.7e-11 73.2 187 34.2
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 4.6e-11 72.4 176 30.7
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 4.6e-11 72.4 172 32.0
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 4.6e-11 72.4 173 35.3
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 4.6e-11 72.4 177 36.2
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 6.0e-11 72.0 185 34.1
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 2.3e-10 70.1 181 33.1
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 3.0e-10 69.7 178 25.8
Nitab4.5_0020402g0020 Nicotiana tabacum HOM05D026636 ORTHO05D022967 5.1e-10 68.9 126 42.9
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 6.7e-10 68.6 160 33.1
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 1.9e-09 67.0 174 36.2
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 2.5e-09 66.6 171 29.8
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.5e-09 66.6 187 33.2
DCAR_021049 Daucus carota HOM05D008142 ORTHO05D009674 4.3e-09 65.9 184 30.4
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 7.4e-09 65.1 165 36.4
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 7.4e-09 65.1 166 36.1
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 9.6e-09 64.7 168 32.7
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.3e-08 64.3 176 33.5
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 1.6e-08 63.9 173 32.4
DCAR_017570 Daucus carota HOM05D019704 ORTHO05D009674 2.1e-08 63.5 182 34.6
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 2.1e-08 63.5 173 30.6
PGSC0003DMG401021252 Solanum tuberosum HOM05D011950 ORTHO05D009674 8.1e-08 61.6 174 30.5
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.4e-07 60.8 173 30.1
Nitab4.5_0004038g0030 Nicotiana tabacum HOM05D026636 ORTHO05D022967 2.4e-07 60.1 174 33.3
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 4.0e-07 59.3 175 30.3
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 5.3e-07 58.9 176 30.7
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 5.3e-07 58.9 165 30.9
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 6.9e-07 58.5 173 27.2
Peaxi162Scf00111g01113 Petunia axillaris HOM05D026636 ORTHO05D022967 1.2e-06 57.8 129 38.0
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 1.5e-06 57.4 184 29.9
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 1.5e-06 57.4 173 32.9
Sopen12g006760 Solanum pennellii HOM05D011950 ORTHO05D009674 2.0e-06 57.0 174 35.1
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.6e-06 56.6 180 35.0
PGSC0003DMG400008560 Solanum tuberosum HOM05D011950 ORTHO05D009674 2.6e-06 56.6 171 33.9
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 3.4e-06 56.2 186 30.1
DCAR_013786 Daucus carota HOM05D019704 ORTHO05D009674 9.9e-06 54.7 176 30.1
TAR626G0317 Trochodendron aralioides HOM05D008142 ORTHO05D009674 9.9e-06 54.7 168 30.4


User provided reference genes

Program Settings