Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.0e-83 312.4 157 100.0
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 1.3e-42 176.8 157 67.5
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 3.8e-42 175.3 117 76.9
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 1.9e-41 172.9 117 76.1
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.7e-40 169.1 163 59.5
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.7e-40 169.1 163 59.5
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.0e-39 167.2 137 65.7
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 1.4e-39 166.8 99 84.8
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.8e-39 166.4 168 59.5
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 2.3e-39 166.0 137 65.7
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 3.9e-39 165.2 157 60.5
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 5.2e-39 164.9 107 78.5
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 6.7e-39 164.5 151 62.3
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.5e-38 163.3 157 59.2
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.5e-38 163.3 175 54.9
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 3.3e-38 162.2 162 58.0
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 4.4e-38 161.8 153 60.1
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 4.4e-38 161.8 143 61.5
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 4.4e-38 161.8 157 58.0
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 9.7e-38 160.6 157 58.6
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 9.7e-38 160.6 93 83.9
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 9.7e-38 160.6 106 77.4
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 9.7e-38 160.6 168 59.5
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 2.2e-37 159.5 131 61.8
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 2.2e-37 159.5 142 64.1
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 2.8e-37 159.1 93 84.9
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.8e-37 159.1 118 72.0
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.8e-37 159.1 118 71.2
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.8e-37 159.1 153 58.2
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 2.8e-37 159.1 138 64.5
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 3.7e-37 158.7 122 68.9
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 3.7e-37 158.7 153 58.2
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 3.7e-37 158.7 158 58.9
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 3.7e-37 158.7 93 82.8
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 3.7e-37 158.7 93 82.8
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 4.8e-37 158.3 141 63.8
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 6.3e-37 157.9 134 64.9
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 6.3e-37 157.9 101 77.2
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.1e-36 157.1 97 80.4
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 1.4e-36 156.8 136 61.8
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 1.4e-36 156.8 103 78.6
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 1.4e-36 156.8 110 73.6
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.4e-36 156.8 110 73.6
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 1.4e-36 156.8 106 77.4
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 1.8e-36 156.4 174 53.4
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 1.8e-36 156.4 141 61.0
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.4e-36 156.0 93 83.9
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.4e-36 156.0 107 74.8
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 2.4e-36 156.0 106 76.4
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 4.1e-36 155.2 118 70.3
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 5.3e-36 154.8 93 82.8
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 5.3e-36 154.8 106 76.4
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.0e-36 154.5 93 82.8
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.0e-36 154.5 121 68.6
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 7.0e-36 154.5 161 56.5
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 9.1e-36 154.1 135 63.0
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.2e-35 153.7 153 60.8
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.6e-35 153.3 170 51.8
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.6e-35 153.3 161 55.9
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.6e-35 153.3 116 70.7
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.0e-35 152.9 145 58.6
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 2.6e-35 152.5 135 62.2
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 3.5e-35 152.1 100 76.0
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 5.9e-35 151.4 136 63.2
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 5.9e-35 151.4 95 78.9
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 7.7e-35 151.0 135 61.5
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 7.7e-35 151.0 135 61.5
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 1.0e-34 150.6 106 74.5
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.7e-34 149.8 118 67.8
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.7e-34 149.8 118 67.8
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 1.7e-34 149.8 160 57.5
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 2.2e-34 149.4 135 61.5
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 2.9e-34 149.1 135 61.5
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 8.5e-34 147.5 96 78.1
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.1e-33 147.1 107 71.0
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.1e-33 147.1 117 69.2
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.1e-33 147.1 97 78.4
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.5e-33 146.7 163 52.8
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.9e-33 146.4 96 76.0
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 3.6e-32 142.1 100 69.0
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 4.7e-32 141.7 140 56.4
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 6.7e-31 137.9 102 64.7
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 2.0e-30 136.3 71 91.5
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 2.6e-30 136.0 118 61.0
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 4.4e-30 135.2 98 67.3
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 9.1e-28 127.5 98 66.3
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.2e-27 127.1 160 51.2
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 4.5e-27 125.2 98 64.3
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 2.2e-26 122.9 80 76.2
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 5.0e-26 121.7 142 50.0
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 1.2e-24 117.1 64 85.9
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 8.0e-24 114.4 75 76.0
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.0e-23 114.0 81 67.9
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 6.8e-23 111.3 172 44.8
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 8.8e-23 110.9 84 64.3
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 5.7e-22 108.2 63 79.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 7.5e-22 107.8 89 62.9
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 7.5e-22 107.8 63 77.8
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 2.8e-16 89.4 62 66.1


User provided reference genes

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