Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g09420 Coffea canephora HOM05D009485 ORTHO05D006259 1.3e-120 436.8 283 100.0
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 2.1e-27 127.1 290 33.8
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 2.8e-27 126.7 289 38.4
Nitab4.5_0002027g0170 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.2e-25 121.3 291 37.5
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 1.7e-24 117.5 303 33.0
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 2.9e-24 116.7 300 40.7
PGSC0003DMG400021282 Solanum tuberosum HOM05D009485 ORTHO05D006259 8.4e-24 115.2 290 41.7
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.1e-23 114.8 180 41.1
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 4.2e-23 112.8 288 36.8
Nitab4.5_0001402g0020 Nicotiana tabacum HOM05D009485 ORTHO05D006259 6.0e-22 109.0 288 36.1
CAN.G1191.3 Capsicum annuum HOM05D009485 ORTHO05D006259 1.0e-21 108.2 283 44.2
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 1.8e-21 107.5 295 34.9
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 9.7e-20 101.7 159 44.0
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 3.7e-19 99.8 179 37.4
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 1.1e-18 98.2 172 37.2
unitig_747.g21610 Utricularia gibba HOM05D009485 ORTHO05D006259 5.3e-18 95.9 290 33.1
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 1.5e-17 94.4 187 36.9
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 5.9e-17 92.4 286 36.0
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 2.2e-16 90.5 309 33.7
Solyc10g007780.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 5.0e-16 89.4 234 32.9
Sopen07g029750 Solanum pennellii HOM05D009485 ORTHO05D006259 6.5e-16 89.0 152 43.4
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.4e-15 87.8 193 36.8
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.4e-15 87.8 193 36.8
SGA_v2.0_scaffold130G34364 Striga asiatica HOM05D009485 ORTHO05D006259 1.9e-15 87.4 288 39.6
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 5.5e-15 85.9 175 34.3
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 5.5e-15 85.9 322 35.4
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 3.0e-13 80.1 303 29.7
Nitab4.5_0001675g0090 Nicotiana tabacum HOM05D009485 ORTHO05D006259 3.9e-13 79.7 153 36.6
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 1.1e-12 78.2 163 32.5
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 3.3e-12 76.6 131 41.2
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 4.3e-12 76.3 150 37.3
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 4.3e-12 76.3 192 34.9
Solyc07g056370.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 5.7e-12 75.9 131 40.5
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 2.2e-11 73.9 146 35.6
unitig_46.g18281 Utricularia gibba HOM05D009485 ORTHO05D006259 2.8e-11 73.6 193 32.1
Oeu020927.1 Olea europaea HOM05D009485 ORTHO05D006259 8.2e-11 72.0 299 32.1
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 2.4e-10 70.5 335 30.7
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 3.1e-10 70.1 140 36.4
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 5.3e-10 69.3 106 41.5
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 5.3e-10 69.3 106 41.5
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 5.3e-10 69.3 106 41.5
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 6.9e-10 68.9 131 37.4
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 9.1e-10 68.6 103 42.7
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.0e-09 67.4 131 36.6
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 2.6e-09 67.0 340 30.3
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.6e-09 67.0 131 36.6
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 7.7e-09 65.5 158 39.2
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 2.2e-08 63.9 313 25.2
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 3.8e-08 63.2 186 31.2
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 8.5e-08 62.0 233 27.0
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 1.4e-07 61.2 301 29.6
Gohir.D11G228900 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.9e-07 60.8 120 34.2
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 2.5e-07 60.5 138 36.2
Lsat_1_v5_gn_6_18081 Lactuca sativa HOM05D009485 ORTHO05D006259 2.1e-06 57.4 160 30.0
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 2.1e-06 57.4 314 29.0
ATR0568G074 Amborella trichopoda HOM05D006785 ORTHO05D006259 2.7e-06 57.0 178 30.3
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 2.7e-06 57.0 170 34.1
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 3.6e-06 56.6 247 26.7
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 7.9e-06 55.5 331 25.7


User provided reference genes

Program Settings