Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.2e-36 156.0 77 100.0
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 5.8e-36 153.7 77 98.7
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.1e-21 106.3 57 91.2
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.4e-21 105.9 56 92.9
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 2.4e-21 105.1 56 91.1
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 6.9e-21 103.6 56 89.3
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 6.9e-21 103.6 56 87.5
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 9.0e-21 103.2 55 85.5
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 9.0e-21 103.2 56 89.3
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 9.0e-21 103.2 56 89.3
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 9.0e-21 103.2 56 89.3
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 1.2e-20 102.8 55 87.3
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 1.5e-20 102.4 56 85.7
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.5e-20 102.4 56 85.7
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 2.0e-20 102.1 56 89.3
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.6e-20 101.7 56 87.5
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 2.6e-20 101.7 56 89.3
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 4.5e-20 100.9 71 71.8
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 4.5e-20 100.9 56 83.9
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 7.6e-20 100.1 56 82.1
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 1.3e-19 99.4 56 80.4
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 1.3e-19 99.4 56 80.4
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.7e-19 99.0 54 87.0
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 1.7e-19 99.0 55 85.5
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.7e-19 99.0 56 82.1
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 2.2e-19 98.6 54 87.0
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 2.2e-19 98.6 56 82.1
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 2.2e-19 98.6 56 83.9
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 2.9e-19 98.2 56 83.9
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 3.8e-19 97.8 54 88.9
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 5.0e-19 97.4 56 80.4
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 5.0e-19 97.4 54 83.3
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 5.0e-19 97.4 56 83.9
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 6.5e-19 97.1 54 87.0
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 8.5e-19 96.7 54 83.3
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 1.4e-18 95.9 56 82.1
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 1.4e-18 95.9 54 83.3
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 2.5e-18 95.1 54 85.2
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 3.2e-18 94.7 54 79.6
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 3.2e-18 94.7 56 83.9
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 3.2e-18 94.7 54 77.8
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 3.2e-18 94.7 54 75.9
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.2e-18 94.7 54 85.2
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 3.2e-18 94.7 54 77.8
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 5.5e-18 94.0 54 75.9
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 7.2e-18 93.6 55 78.2
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 7.2e-18 93.6 55 78.2
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 7.2e-18 93.6 55 78.2
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 1.2e-17 92.8 54 74.1
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.6e-17 92.4 54 77.8
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 2.1e-17 92.0 55 76.4
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 2.7e-17 91.7 54 75.9
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 3.6e-17 91.3 54 79.6
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 4.6e-17 90.9 55 80.0
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 4.6e-17 90.9 54 74.1
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 4.6e-17 90.9 54 81.5
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 6.1e-17 90.5 54 74.1
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 7.9e-17 90.1 55 72.7
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.0e-16 89.7 54 79.6
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 1.0e-16 89.7 54 72.2
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.3e-16 89.4 54 77.8
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 2.3e-16 88.6 56 75.0
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 2.3e-16 88.6 56 73.2
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 8.7e-16 86.7 53 75.5
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 8.7e-16 86.7 68 67.6
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 1.1e-15 86.3 55 69.1
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 1.5e-15 85.9 54 66.7
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 2.5e-15 85.1 54 75.9
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 3.3e-15 84.7 56 67.9
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 1.6e-14 82.4 54 68.5
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.4e-13 79.3 53 73.6
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.2e-12 76.3 53 62.3
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 4.5e-12 74.3 52 61.5
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 7.7e-12 73.6 49 71.4
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.2e-11 72.0 50 70.0
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.2e-10 68.2 54 59.3
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.2e-09 66.2 39 79.5
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.6e-09 65.9 52 59.6
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 1.6e-09 65.9 52 59.6
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 3.0e-08 61.6 40 62.5
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.1e-07 59.7 44 65.9
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.0e-07 58.9 49 63.3
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.6e-07 58.5 55 49.1
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 2.8e-06 55.1 48 52.1


User provided reference genes

Program Settings