Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 2.1e-115 419.1 220 100.0
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 7.0e-34 148.3 184 53.3
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 1.6e-33 147.1 191 51.8
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 1.3e-32 144.1 199 53.8
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 5.5e-31 138.7 229 47.2
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 9.5e-31 137.9 195 52.8
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 6.1e-30 135.2 198 51.5
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 4.0e-29 132.5 192 51.0
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 4.4e-28 129.0 186 48.4
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 4.4e-28 129.0 188 49.5
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 1.2e-25 120.9 204 45.1
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 2.0e-25 120.2 194 46.4
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 4.3e-23 112.5 207 43.0
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 1.6e-22 110.5 206 44.2
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 6.1e-22 108.6 190 46.8
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 8.0e-22 108.2 197 46.2
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 1.4e-21 107.5 208 43.8
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.8e-21 107.1 208 43.8
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 3.0e-21 106.3 168 48.2
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 2.0e-20 103.6 206 41.3
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 3.4e-20 102.8 184 47.3
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 7.5e-20 101.7 184 46.7
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 7.5e-20 101.7 184 40.8
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 2.2e-19 100.1 195 42.6
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 2.9e-19 99.8 192 42.2
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 2.9e-19 99.8 198 42.9
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 3.7e-19 99.4 200 39.0
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 1.1e-18 97.8 167 49.7
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 1.8e-18 97.1 201 41.3
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.8e-18 97.1 212 43.4
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 2.4e-18 96.7 195 42.1
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 2.4e-18 96.7 213 40.4
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 5.4e-18 95.5 192 42.7
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 3.5e-17 92.8 186 40.3
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 3.5e-17 92.8 201 38.3
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 1.7e-16 90.5 210 39.5
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 1.7e-16 90.5 197 41.6
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 1.7e-16 90.5 189 42.9
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 2.3e-16 90.1 197 42.6
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 1.9e-15 87.0 193 42.0
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 1.9e-15 87.0 183 41.0
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 2.5e-15 86.7 171 42.7
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 4.3e-15 85.9 197 41.6
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 5.6e-15 85.5 201 39.3
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 1.2e-14 84.3 167 43.1
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 1.2e-14 84.3 132 49.2
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 2.8e-14 83.2 173 42.8
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 3.6e-14 82.8 197 39.1
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 3.6e-14 82.8 160 40.6
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 4.7e-14 82.4 158 45.6
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 4.7e-14 82.4 194 40.2
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 1.0e-13 81.3 215 37.7
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 1.8e-13 80.5 159 43.4
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 2.3e-13 80.1 169 42.0
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 3.1e-13 79.7 201 35.8
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 2.0e-12 77.0 170 43.5
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 2.6e-12 76.6 195 35.9
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 5.8e-12 75.5 186 41.9
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 5.8e-12 75.5 200 39.5
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 1.7e-11 73.9 173 41.0
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 3.7e-11 72.8 224 38.4
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 6.4e-11 72.0 218 39.0
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 8.3e-11 71.6 171 39.8
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 1.4e-10 70.9 205 35.6
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 2.4e-10 70.1 166 45.2
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 4.1e-10 69.3 168 39.3
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 4.1e-10 69.3 168 39.3
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 4.1e-10 69.3 168 39.3
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 5.4e-10 68.9 168 39.3
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 9.2e-10 68.2 124 43.5
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 9.2e-10 68.2 159 39.0
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 1.2e-09 67.8 170 39.4
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 2.0e-09 67.0 217 38.2
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 6.0e-09 65.5 160 41.2
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 7.8e-09 65.1 197 35.0
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 1.0e-08 64.7 70 57.1
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 3.3e-07 59.7 177 37.3
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 5.6e-07 58.9 205 34.6
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 5.6e-07 58.9 133 41.4
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 3.6e-06 56.2 177 36.2
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 8.1e-06 55.1 97 44.3


User provided reference genes

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