Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 2.3e-208 728.8 411 100.0
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 9.2e-80 301.6 424 46.7
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 1.2e-74 284.6 435 45.3
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.9e-72 277.3 474 41.8
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 5.1e-70 269.2 439 43.7
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 5.1e-70 269.2 434 44.9
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 1.9e-69 267.3 435 43.9
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 8.1e-68 261.9 477 41.9
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 9.9e-66 255.0 457 41.6
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 1.1e-64 251.5 458 40.8
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 4.2e-64 249.6 493 36.3
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 1.2e-63 248.1 440 40.7
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 2.1e-63 247.3 431 42.2
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 5.1e-62 242.7 474 39.5
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 7.4e-61 238.8 465 39.4
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 9.6e-61 238.4 431 41.5
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 2.8e-60 236.9 429 42.2
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 6.2e-60 235.7 444 42.1
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 6.2e-60 235.7 446 40.8
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 1.4e-59 234.6 428 40.2
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 5.3e-59 232.6 427 43.1
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 2.0e-58 230.7 426 42.0
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 4.5e-58 229.6 436 40.4
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 5.8e-58 229.2 446 40.6
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 4.9e-57 226.1 433 39.3
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 9.3e-56 221.9 446 43.0
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.2e-55 221.5 430 42.3
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 7.9e-55 218.8 432 40.7
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 7.9e-55 218.8 428 42.1
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 1.0e-54 218.4 449 37.4
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.3e-54 217.2 430 42.6
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 6.7e-54 215.7 466 37.8
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.1e-53 214.9 206 56.3
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 1.1e-53 214.9 444 38.7
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 1.1e-53 214.9 422 39.1
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 1.5e-53 214.5 426 40.6
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.9e-53 214.2 428 41.4
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 2.5e-53 213.8 423 39.0
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 9.6e-53 211.8 440 40.9
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 1.4e-51 208.0 432 41.2
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 1.8e-51 207.6 452 37.2
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 4.0e-51 206.5 412 39.1
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 6.9e-51 205.7 448 38.2
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 9.0e-51 205.3 482 35.3
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 1.2e-50 204.9 429 37.3
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 2.0e-50 204.1 451 36.8
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 4.5e-50 203.0 419 38.7
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 1.0e-49 201.8 434 39.6
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 2.9e-49 200.3 435 39.5
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 3.8e-49 199.9 431 41.8
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 8.4e-49 198.7 449 37.2
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 1.4e-48 198.0 415 39.0
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 3.2e-48 196.8 443 37.0
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 1.2e-47 194.9 451 37.0
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 1.6e-47 194.5 419 40.8
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 2.1e-47 194.1 462 36.8
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 4.6e-47 193.0 384 40.6
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 6.0e-47 192.6 318 44.0
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 1.8e-46 191.0 442 36.9
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 3.9e-46 189.9 430 37.2
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 2.5e-45 187.2 288 45.8
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 4.3e-45 186.4 454 35.2
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 1.6e-44 184.5 424 37.0
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 2.1e-44 184.1 449 34.7
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 1.4e-43 181.4 413 36.3
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 1.4e-43 181.4 439 34.2
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 1.4e-43 181.4 495 34.3
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 1.8e-43 181.0 430 38.8
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 3.1e-43 180.3 433 37.6
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 3.1e-43 180.3 433 37.6
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.1e-43 179.9 445 34.6
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 6.9e-43 179.1 424 37.5
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 1.2e-42 178.3 432 33.3
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 1.3e-41 174.9 412 36.9
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 3.2e-40 170.2 429 35.4
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 9.3e-40 168.7 434 34.8
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 6.1e-39 166.0 460 33.0
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 1.3e-38 164.9 419 34.6
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 1.3e-38 164.9 430 34.2
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 2.3e-38 164.1 448 34.4
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 5.1e-38 162.9 430 34.0
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 1.9e-37 161.0 428 33.6
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 1.9e-37 161.0 428 33.6
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 2.2e-36 157.5 443 40.9
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 4.8e-36 156.4 428 32.9
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 6.3e-36 156.0 466 33.7
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 1.4e-35 154.8 439 33.7
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 9.0e-35 152.1 417 34.3
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 7.7e-34 149.1 426 31.2
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 5.0e-33 146.4 433 33.9
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 1.1e-32 145.2 490 33.5
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 3.2e-32 143.7 460 31.5
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 1.2e-31 141.7 283 39.9
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 2.3e-30 137.5 475 32.2
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 2.2e-28 131.0 422 30.6
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 1.1e-27 128.6 171 45.0
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 4.1e-27 126.7 334 32.3
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 7.7e-26 122.5 417 34.1
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 1.4e-22 111.7 429 28.7
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 5.1e-22 109.8 129 54.3
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 5.1e-22 109.8 129 54.3
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 1.3e-20 105.1 408 29.7
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 1.2e-18 98.6 189 40.2
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 1.6e-18 98.2 304 32.6
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 1.0e-17 95.5 200 41.5
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 9.4e-16 89.0 238 31.9
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.5e-13 81.6 238 31.5
AUR62043432 Chenopodium quinoa HOM05D006668 ORTHO05D008252 2.7e-10 70.9 124 42.7
unitig_46.g18247 Utricularia gibba HOM05D006668 ORTHO05D008252 4.5e-10 70.1 444 27.3
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 5.9e-10 69.7 206 34.0
RcHm_v2.0_Chr7g0225321 Rosa chinensis HOM05D006668 ORTHO05D008252 1.0e-09 68.9 103 44.7
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 3.8e-09 67.0 452 25.0
Actinidia11116 Actinidia chinensis HOM05D006668 ORTHO05D008252 4.2e-08 63.5 214 29.4
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 1.4e-06 58.5 277 28.5
Ah.01g015540 Amaranthus hybridus HOM05D006668 ORTHO05D008252 6.8e-06 56.2 143 41.3
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 6.8e-06 56.2 118 37.3


User provided reference genes

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