Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g07480 Coffea canephora HOM05D006085 ORTHO05D007559 1.1e-43 179.5 86 100.0
Cc00_g12330 Coffea canephora HOM05D006085 ORTHO05D007559 6.1e-42 173.7 86 96.5
Hma1.2p1_0002F.1_g002100 Hydrangea macrophylla HOM05D006085 ORTHO05D007559 1.0e-33 146.4 86 80.2
Nitab4.5_0001752g0030 Nicotiana tabacum HOM05D006085 ORTHO05D007559 6.3e-31 137.1 86 74.4
Nitab4.5_0000638g0110 Nicotiana tabacum HOM05D006085 ORTHO05D007559 2.4e-30 135.2 86 72.1
Sopen07g027790 Solanum pennellii HOM05D006085 ORTHO05D007559 7.0e-30 133.7 86 73.3
CAN.G209.32 Capsicum annuum HOM05D006085 ORTHO05D007559 2.0e-29 132.1 86 72.1
GSVIVG01020577001 Vitis vinifera HOM05D006085 ORTHO05D007559 2.0e-29 132.1 86 74.4
Actinidia30466 Actinidia chinensis HOM05D006085 ORTHO05D007559 3.5e-29 131.3 86 72.1
Rhsim06G0139100 Rhododendron simsii HOM05D006085 ORTHO05D007559 3.5e-29 131.3 86 72.1
Lj8C109T7 Lonicera japonica HOM05D006085 ORTHO05D007559 1.3e-28 129.4 86 70.9
PGSC0003DMG400032825 Solanum tuberosum HOM05D006085 ORTHO05D007559 2.2e-28 128.6 86 69.8
CSS0044112 Camellia sinensis var. sinensis HOM05D006085 ORTHO05D007559 2.9e-28 128.3 86 68.6
Peaxi162Scf00981g00430 Petunia axillaris HOM05D006085 ORTHO05D007559 2.9e-28 128.3 86 69.8
vmacro12328 Vaccinium macrocarpon HOM05D006085 ORTHO05D007559 3.8e-28 127.9 86 70.9
Solyc07g053820.3 Solanum lycopersicum HOM05D006085 ORTHO05D007559 5.0e-28 127.5 86 70.9
MSTRG.15247 Avicennia marina HOM05D006085 ORTHO05D007559 6.5e-28 127.1 86 66.3
Migut.M00167 Erythranthe guttata HOM05D006085 ORTHO05D007559 2.5e-27 125.2 82 72.0
TAR626G0071 Trochodendron aralioides HOM05D006085 ORTHO05D007559 4.2e-27 124.4 84 71.4
Haze_13204 Corylus avellana HOM05D006085 ORTHO05D007559 6.1e-26 120.6 88 67.0
FvH4_6g26520 Fragaria vesca HOM05D006085 ORTHO05D007559 6.1e-26 120.6 86 64.0
Nn1g04152 Nelumbo nucifera HOM05D006085 ORTHO05D007559 6.1e-26 120.6 86 66.3
RcHm_v2.0_Chr2g0127641 Rosa chinensis HOM05D006085 ORTHO05D007559 8.0e-26 120.2 86 64.0
MD17G1236100 Malus domestica HOM05D006085 ORTHO05D007559 1.0e-25 119.8 86 65.1
Atru.chr6.2894 Acer truncatum HOM05D006085 ORTHO05D007559 1.8e-25 119.0 86 67.4
CANSAT64G0553 Cannabis sativa HOM05D006085 ORTHO05D007559 1.8e-25 119.0 86 64.0
Prupe.3G189400 Prunus persica HOM05D006085 ORTHO05D007559 3.0e-25 118.2 84 65.5
QL08p039688 Quercus lobata HOM05D006085 ORTHO05D007559 3.0e-25 118.2 85 68.2
FAN02G0764 Fragaria x ananassa HOM05D006085 ORTHO05D007559 4.0e-25 117.9 86 64.0
CiPaw.03G179300 Carya illinoinensis HOM05D006085 ORTHO05D007559 6.7e-25 117.1 86 67.4
MELO3C018706.2 Cucumis melo HOM05D006085 ORTHO05D007559 1.2e-24 116.3 86 62.8
CsaV3_7G005870 Cucumis sativus L. HOM05D006085 ORTHO05D007559 2.0e-24 115.5 86 62.8
TWI59G1154 Tripterygium wilfordii HOM05D006085 ORTHO05D007559 2.0e-24 115.5 86 64.0
ClCG07G002490 Citrullus lanatus HOM05D006085 ORTHO05D007559 3.3e-24 114.8 86 61.6
PSO675G5281 Papaver somniferum HOM05D006085 ORTHO05D007559 7.5e-24 113.6 84 63.1
Eucgr.A01834 Eucalyptus grandis HOM05D006085 ORTHO05D007559 1.3e-23 112.8 86 64.0
Lsat_1_v5_gn_4_66841 Lactuca sativa HOM05D006085 ORTHO05D007559 1.3e-23 112.8 86 62.8
DCAR_021253 Daucus carota HOM05D006085 ORTHO05D007559 2.8e-23 111.7 86 62.8
PSO541G4164 Papaver somniferum HOM05D006085 ORTHO05D007559 8.3e-23 110.2 84 61.9
ECA234G4181 Erigeron canadensis HOM05D006085 ORTHO05D007559 1.4e-22 109.4 86 60.5
Sc12g0003150 Simmondsia chinensis HOM05D006085 ORTHO05D007559 1.8e-22 109.0 86 61.6
Ciclev10014891m.g Citrus clementina HOM05D006085 ORTHO05D007559 2.4e-22 108.6 86 61.6
THA.LOC104804055 Tarenaya hassleriana HOM05D006085 ORTHO05D007559 5.3e-22 107.5 86 57.0
Duzib052G1056 Durio zibethinus HOM05D006085 ORTHO05D007559 1.2e-21 106.3 86 62.8
Manes.13G147400 Manihot esculenta HOM05D006085 ORTHO05D007559 1.6e-21 105.9 86 60.5
Glyma.12G116400 Glycine max HOM05D006085 ORTHO05D007559 2.7e-21 105.1 86 58.1
HanXRQChr10g0284071 Helianthus annuus HOM05D006085 ORTHO05D007559 2.7e-21 105.1 86 61.6
Lj3g0015664 Lotus japonicus HOM05D006085 ORTHO05D007559 2.7e-21 105.1 86 60.5
AT2G20635 Arabidopsis thaliana HOM05D006085 ORTHO05D007559 3.5e-21 104.8 86 58.1
COL.COLO4_05950 Corchorus olitorius HOM05D006085 ORTHO05D007559 3.5e-21 104.8 86 61.6
Cpa.g.sc83.67 Carica papaya HOM05D006085 ORTHO05D007559 4.5e-21 104.4 86 58.1
Glyma.06G290500 Glycine max HOM05D006085 ORTHO05D007559 5.9e-21 104.0 86 57.0
Psat7g168600 Pisum sativum HOM05D006085 ORTHO05D007559 7.7e-21 103.6 86 58.1
Lalb_Chr19g0135161 Lupinus albus HOM05D006085 ORTHO05D007559 1.7e-20 102.4 86 58.1
Hund01031 Selenicereus undatus HOM05D006085 ORTHO05D007559 1.7e-20 102.4 86 59.3
TPR.G23020 Trifolium pratense HOM05D006085 ORTHO05D007559 1.7e-20 102.4 86 59.3
TPR.G31028 Trifolium pratense HOM05D006085 ORTHO05D007559 1.7e-20 102.4 86 59.3
MBI18_g34208_MAGBIO Magnolia biondii HOM05D006085 ORTHO05D007559 2.2e-20 102.1 86 60.5
AL3G53720 Arabidopsis lyrata HOM05D006085 ORTHO05D007559 3.8e-20 101.3 86 55.8
VMungo1127G1010 Vigna mungo HOM05D006085 ORTHO05D007559 3.8e-20 101.3 86 57.0
Manes.13G145916 Manihot esculenta HOM05D006085 ORTHO05D007559 5.0e-20 100.9 84 58.3
Ca_18934_v3 Cicer arietinum L. HOM05D006085 ORTHO05D007559 6.5e-20 100.5 86 57.0
Gohir.A13G055500 Gossypium hirsutum HOM05D006085 ORTHO05D007559 6.5e-20 100.5 86 60.5
Gorai.013G075800 Gossypium raimondii HOM05D006085 ORTHO05D007559 6.5e-20 100.5 86 60.5
Phvul.011G125900 Phaseolus vulgaris HOM05D006085 ORTHO05D007559 8.5e-20 100.1 86 54.7
PGR042G2089 Punica granatum HOM05D006085 ORTHO05D007559 1.1e-19 99.8 86 58.1
Gohir.D13G066600 Gossypium hirsutum HOM05D006085 ORTHO05D007559 1.5e-19 99.4 86 59.3
Thecc.02G182800 Theobroma cacao HOM05D006085 ORTHO05D007559 1.5e-19 99.4 86 58.1
AUR62038885 Chenopodium quinoa HOM05D006085 ORTHO05D007559 3.2e-19 98.2 86 53.5
Os07g0508500 Oryza sativa ssp. japonica HOM05D006085 ORTHO05D007559 3.2e-19 98.2 83 55.4
arahy.Tifrunner.gnm1.ann1.RY71RI Arachis hypogaea HOM05D006085 ORTHO05D007559 5.5e-19 97.4 86 53.5
Sp3g33890 Schrenkiella parvula HOM05D006085 ORTHO05D007559 7.2e-19 97.1 86 55.8
BraA09t41263Z Brassica rapa HOM05D006085 ORTHO05D007559 9.4e-19 96.7 86 54.7
Carub.0003s3516 Capsella rubella HOM05D006085 ORTHO05D007559 9.4e-19 96.7 86 53.5
BcaC07g41200 Brassica carinata HOM05D006085 ORTHO05D007559 1.6e-18 95.9 86 54.7
C08p42090 Brassica napus HOM05D006085 ORTHO05D007559 1.6e-18 95.9 86 54.7
BolC8t51769H Brassica oleracea HOM05D006085 ORTHO05D007559 1.6e-18 95.9 86 54.7
Medtr4g078555 Medicago truncatula HOM05D006085 ORTHO05D007559 1.6e-18 95.9 86 55.8
SGA_v2.0_scaffold70G23511 Striga asiatica HOM05D006085 ORTHO05D007559 1.6e-18 95.9 73 60.3
Zm00001eb322380 Zea mays HOM05D006085 ORTHO05D007559 3.6e-18 94.7 86 54.7
BcaB08g34934 Brassica carinata HOM05D006085 ORTHO05D007559 4.7e-18 94.4 86 54.7
A09p58770 Brassica napus HOM05D006085 ORTHO05D007559 4.7e-18 94.4 86 53.5
Prupe.3G139600 Prunus persica HOM05D006085 ORTHO05D007559 6.1e-18 94.0 82 58.5
Aa31LG8G17530 Aethionema arabicum HOM05D006085 ORTHO05D007559 8.0e-18 93.6 86 52.3
AUR62038975 Chenopodium quinoa HOM05D006085 ORTHO05D007559 1.4e-17 92.8 86 52.3
ATR0217G009 Amborella trichopoda HOM05D006085 ORTHO05D007559 2.3e-17 92.0 84 52.4
arahy.Tifrunner.gnm1.ann1.9UNY9A Arachis hypogaea HOM05D006085 ORTHO05D007559 2.3e-17 92.0 82 52.4
arahy.Tifrunner.gnm1.ann1.C4PCKW Arachis hypogaea HOM05D006085 ORTHO05D007559 2.3e-17 92.0 82 52.4
Thhalv10001957m.g Eutrema salsugineum HOM05D006085 ORTHO05D007559 3.0e-17 91.7 86 50.0
CARHR111290 Cardamine hirsuta HOM05D006085 ORTHO05D007559 2.0e-16 89.0 86 51.2
Aqoxy1G02363 Aquilegia oxysepala HOM05D006085 ORTHO05D007559 3.4e-16 88.2 85 55.3
Potri.007G139000 Populus trichocarpa HOM05D006085 ORTHO05D007559 4.4e-16 87.8 86 55.8
Ah.01g015320 Amaranthus hybridus HOM05D006085 ORTHO05D007559 7.5e-16 87.0 86 53.5
HPP92_014185 Vanilla planifolia HOM05D006085 ORTHO05D007559 1.8e-14 82.4 79 51.9
arahy.Tifrunner.gnm1.ann1.UWD03M Arachis hypogaea HOM05D006085 ORTHO05D007559 7.0e-14 80.5 83 49.4
unitig_21.g20425 Utricularia gibba HOM05D006085 ORTHO05D007559 2.3e-12 75.5 53 60.4
Pp3c20_12130 Physcomitrium patens HOM05D006085 ORTHO05D007559 3.8e-12 74.7 85 49.4
Sabra07G0112000 Salix brachista HOM05D006085 ORTHO05D007559 3.3e-11 71.6 86 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5266 Anthoceros agrestis HOM05D006085 ORTHO05D007559 1.8e-09 65.9 79 44.3
Oeu036070.3 Olea europaea HOM05D006085 ORTHO05D007559 2.6e-08 62.0 42 61.9
Mapoly0009s0056 Marchantia polymorpha HOM05D006085 ORTHO05D007559 1.1e-06 56.6 78 42.3


User provided reference genes

Program Settings