Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g06730 Coffea canephora HOM05D006722 ORTHO05D007944 1.8e-56 222.6 132 100.0
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 3.0e-24 115.5 127 51.2
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 5.7e-23 111.3 131 57.3
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 6.3e-22 107.8 121 51.2
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.3e-19 100.1 129 42.6
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 3.8e-19 98.6 127 41.7
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 2.5e-18 95.9 135 53.3
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 2.5e-18 95.9 128 44.5
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 3.2e-18 95.5 132 55.3
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 9.4e-18 94.0 129 45.0
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 9.4e-18 94.0 134 51.5
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.6e-17 93.2 93 50.5
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 3.6e-17 92.0 124 42.7
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 1.8e-16 89.7 120 44.2
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 8.8e-16 87.4 129 38.8
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 4.4e-15 85.1 134 36.6
Rhsim04G0066600 Rhododendron simsii HOM05D006722 ORTHO05D007944 7.4e-15 84.3 118 44.9
Nitab4.5_0005380g0010 Nicotiana tabacum HOM05D006722 ORTHO05D007944 3.7e-14 82.0 131 42.0
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 1.8e-13 79.7 130 43.1
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 2.4e-13 79.3 124 41.9
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 3.1e-13 79.0 121 38.0
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 3.1e-13 79.0 124 50.0
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 9.1e-13 77.4 130 47.7
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 1.2e-12 77.0 123 40.7
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 1.6e-12 76.6 119 36.1
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 2.6e-12 75.9 162 42.6
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 3.5e-12 75.5 123 38.2
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 4.5e-12 75.1 129 40.3
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 1.0e-11 73.9 131 35.9
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 1.0e-11 73.9 118 39.0
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 1.0e-11 73.9 122 40.2
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.3e-11 73.6 124 39.5
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 1.7e-11 73.2 127 37.8
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 1.7e-11 73.2 128 45.3
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 2.9e-11 72.4 125 39.2
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 3.8e-11 72.0 114 39.5
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 8.5e-11 70.9 118 35.6
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 1.1e-10 70.5 122 40.2
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 1.1e-10 70.5 129 34.9
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 1.1e-10 70.5 93 43.0
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 1.9e-10 69.7 126 49.2
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 4.2e-10 68.6 116 35.3
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 7.2e-10 67.8 118 39.0
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 9.4e-10 67.4 127 34.6
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 9.4e-10 67.4 127 34.6
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 9.4e-10 67.4 131 34.4
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.2e-09 67.0 132 37.9
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 3.6e-09 65.5 119 37.0
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 3.0e-08 62.4 128 33.6
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 3.0e-08 62.4 128 33.6
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 3.0e-08 62.4 128 33.6
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 5.2e-08 61.6 126 33.3
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 6.7e-08 61.2 129 48.8
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 1.2e-07 60.5 131 34.4
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 1.2e-07 60.5 120 34.2
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 1.2e-07 60.5 123 49.6
VMungo1080G0484 Vigna mungo HOM05D006722 ORTHO05D007944 1.2e-07 60.5 127 45.7
Actinidia11069 Actinidia chinensis HOM05D006722 ORTHO05D007944 1.5e-07 60.1 74 40.5
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 2.6e-07 59.3 128 36.7
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 3.3e-07 58.9 146 30.8
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 3.3e-07 58.9 115 37.4
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 5.7e-07 58.2 118 33.1
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 1.3e-06 57.0 133 42.1
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 1.3e-06 57.0 124 37.9
Sabra13G0116200 Salix brachista HOM05D006722 ORTHO05D007944 1.7e-06 56.6 104 38.5
MBI02_g19252_MAGBIO Magnolia biondii HOM05D006722 ORTHO05D007944 2.2e-06 56.2 64 37.5
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 2.2e-06 56.2 150 42.7
HPP92_001821 Vanilla planifolia HOM05D026263 ORTHO05D007944 4.8e-06 55.1 110 37.3
Gohir.D06G117266 Gossypium hirsutum HOM05D006722 ORTHO05D007944 6.3e-06 54.7 115 32.2
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 8.2e-06 54.3 117 30.8


User provided reference genes

Program Settings