Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 7.1e-139 497.3 255 100.0
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 5.5e-107 391.3 255 74.5
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 7.9e-106 387.5 257 75.1
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.4e-105 386.7 255 72.2
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.5e-104 383.3 257 74.3
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 3.3e-104 382.1 255 72.2
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 4.4e-104 381.7 255 72.2
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 9.7e-104 380.6 256 73.8
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 3.7e-103 378.6 256 70.7
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 2.6e-101 372.5 256 72.3
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 3.5e-101 372.1 256 72.7
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.2e-98 363.6 255 70.2
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 2.7e-98 362.5 256 72.3
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 3.6e-98 362.1 256 68.4
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 8.0e-98 360.9 256 69.1
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 1.0e-97 360.5 256 71.9
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 2.0e-96 356.3 254 68.9
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 9.7e-96 354.0 257 68.9
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 1.7e-95 353.2 258 68.2
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 2.8e-95 352.4 255 68.6
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 2.8e-95 352.4 256 69.5
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 3.7e-95 352.1 258 67.4
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 8.2e-95 350.9 255 67.1
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 1.8e-94 349.7 256 68.0
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 3.1e-94 349.0 255 66.3
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.6e-93 346.7 256 66.8
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.6e-93 346.7 301 59.5
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 2.6e-93 345.9 255 65.5
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 7.7e-93 344.4 256 68.4
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 7.7e-93 344.4 260 67.3
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.7e-92 343.2 256 68.0
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.2e-92 342.8 256 66.4
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 2.2e-92 342.8 257 66.5
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 5.0e-92 341.7 256 66.0
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 8.5e-92 340.9 252 65.9
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.1e-91 340.5 259 66.4
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.1e-91 340.5 256 65.6
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 1.1e-91 340.5 255 65.5
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 2.5e-91 339.3 256 63.7
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 2.5e-91 339.3 260 64.2
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 2.5e-91 339.3 256 65.2
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 3.2e-91 339.0 256 65.2
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 3.2e-91 339.0 258 64.0
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 4.2e-91 338.6 256 64.8
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 5.5e-91 338.2 256 65.6
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 7.2e-91 337.8 256 65.2
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 7.2e-91 337.8 258 66.7
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 9.4e-91 337.4 255 65.9
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 2.1e-90 336.3 231 71.0
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 3.6e-90 335.5 254 66.5
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 6.1e-90 334.7 256 65.2
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 8.0e-90 334.3 253 64.4
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 8.0e-90 334.3 256 62.9
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.4e-89 333.6 255 63.9
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 2.3e-89 332.8 255 64.7
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 3.0e-89 332.4 255 63.1
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 3.0e-89 332.4 255 64.7
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 5.2e-89 331.6 255 62.7
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 5.2e-89 331.6 256 64.8
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 6.8e-89 331.3 255 64.7
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 6.8e-89 331.3 255 64.7
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 6.8e-89 331.3 253 65.2
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 2.6e-88 329.3 258 65.5
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.6e-88 329.3 255 64.3
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 3.4e-88 328.9 255 63.5
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 4.4e-88 328.6 255 63.5
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 4.4e-88 328.6 255 63.5
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 5.7e-88 328.2 255 64.3
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 5.7e-88 328.2 255 63.9
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 7.5e-88 327.8 255 63.5
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 7.5e-88 327.8 255 63.5
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 1.3e-87 327.0 255 62.7
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 2.2e-87 326.2 253 64.0
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 3.7e-87 325.5 224 71.0
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 4.8e-87 325.1 255 62.7
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 1.4e-86 323.6 256 62.1
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 2.4e-86 322.8 258 62.8
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 7.0e-86 321.2 258 62.4
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 7.0e-86 321.2 256 61.3
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 7.0e-86 321.2 255 60.8
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 3.5e-85 318.9 255 61.2
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 3.5e-85 318.9 255 63.1
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 2.2e-84 316.2 256 59.8
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 2.2e-84 316.2 233 65.2
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 3.8e-84 315.5 256 60.9
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 3.8e-84 315.5 256 60.5
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 1.1e-83 313.9 259 58.7
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 1.5e-83 313.5 258 60.5
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 2.5e-83 312.8 258 62.8
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 3.2e-83 312.4 259 57.9
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 7.2e-83 311.2 256 60.2
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 9.4e-83 310.8 275 58.2
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 2.7e-82 309.3 257 59.9
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.8e-81 306.6 256 58.2
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 3.0e-81 305.8 256 60.2
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 4.0e-81 305.4 255 60.4
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 2.0e-80 303.1 203 70.9
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 3.4e-80 302.4 256 58.2
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 5.4e-78 295.0 257 57.2
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 9.1e-78 294.3 236 60.6
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.6e-77 293.5 255 56.9
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 4.1e-70 268.9 236 57.2
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 3.6e-66 255.8 189 66.1
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 6.4e-63 245.0 230 53.9
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 1.2e-45 187.6 162 59.3
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.1e-43 181.0 125 68.0
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 5.1e-36 155.6 138 59.4
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.3e-28 131.0 251 37.5
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 6.7e-20 102.1 248 28.2
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 7.4e-19 98.6 195 37.4
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 1.6e-18 97.4 75 61.3
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 3.3e-11 73.2 236 26.3
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 3.4e-08 63.2 93 44.1
Mapoly0028s0045 Marchantia polymorpha HOM05D037891 ORTHO05D008297 9.3e-06 55.1 216 24.1


User provided reference genes

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