Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g06170 Coffea canephora HOM05D000831 ORTHO05D000660 3.3e-23 110.9 59 100.0
Cc05_g06130 Coffea canephora HOM05D000831 ORTHO05D000660 1.9e-15 85.1 59 81.4
Cc05_g06150 Coffea canephora HOM05D000831 ORTHO05D000660 5.7e-15 83.6 59 79.7
Cc05_g06120 Coffea canephora HOM05D000831 ORTHO05D000660 9.1e-13 76.3 59 76.3
Cc05_g06160 Coffea canephora HOM05D000831 ORTHO05D000660 1.5e-12 75.5 59 76.3
Cc00_g31440 Coffea canephora HOM05D000831 ORTHO05D000660 7.7e-12 73.2 59 69.5
Haze_09537 Corylus avellana HOM05D000831 ORTHO05D000660 1.0e-08 62.8 59 57.6
CSS0048593 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 1.8e-08 62.0 59 62.7
Dinv15499 Davidia involucrata HOM05D000831 ORTHO05D000660 1.8e-08 62.0 59 62.7
Thecc.02G170800 Theobroma cacao HOM05D000831 ORTHO05D000660 5.1e-08 60.5 59 62.7
MD17G1085400 Malus domestica HOM05D000831 ORTHO05D000660 6.7e-08 60.1 56 57.1
CSS0018979 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 8.8e-08 59.7 59 59.3
CSS0037125 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 1.1e-07 59.3 59 61.0
CSS0040678 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 1.1e-07 59.3 59 61.0
CSS0047300 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 1.1e-07 59.3 59 61.0
CiPaw.03G168900 Carya illinoinensis HOM05D000831 ORTHO05D000660 1.1e-07 59.3 59 59.3
CiPaw.03G169000 Carya illinoinensis HOM05D000831 ORTHO05D000660 1.1e-07 59.3 59 59.3
CSS0015806 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 1.5e-07 58.9 59 59.3
COL.COLO4_13653 Corchorus olitorius HOM05D000831 ORTHO05D000660 2.6e-07 58.2 59 59.3
Nn1g03864 Nelumbo nucifera HOM05D000831 ORTHO05D000660 2.6e-07 58.2 59 57.6
QL08p037077 Quercus lobata HOM05D000831 ORTHO05D000660 2.6e-07 58.2 58 60.3
QL08p037097 Quercus lobata HOM05D000831 ORTHO05D000660 2.6e-07 58.2 58 60.3
CSS0022903 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 3.3e-07 57.8 59 57.6
CSS0049002 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 3.3e-07 57.8 59 57.6
CiPaw.03G169100 Carya illinoinensis HOM05D000831 ORTHO05D000660 3.3e-07 57.8 59 57.6
QL08p017373 Quercus lobata HOM05D000831 ORTHO05D000660 3.3e-07 57.8 58 56.9
QL08p017396 Quercus lobata HOM05D000831 ORTHO05D000660 3.3e-07 57.8 58 56.9
Cfa014533 Carpinus fangiana HOM05D000831 ORTHO05D000660 4.4e-07 57.4 59 59.3
Cfa014536 Carpinus fangiana HOM05D000831 ORTHO05D000660 4.4e-07 57.4 59 59.3
TAR629G3265 Trochodendron aralioides HOM05D000831 ORTHO05D000660 4.4e-07 57.4 59 54.2
CiPaw.03G169200 Carya illinoinensis HOM05D000831 ORTHO05D000660 5.7e-07 57.0 59 57.6
Glyma.12G200600 Glycine max HOM05D000831 ORTHO05D000660 5.7e-07 57.0 59 61.0
Lsat_1_v5_gn_3_40521 Lactuca sativa HOM05D000831 ORTHO05D000660 5.7e-07 57.0 60 58.3
PGR142G0205 Punica granatum HOM05D000831 ORTHO05D000660 5.7e-07 57.0 59 57.6
ECA246G0084 Erigeron canadensis HOM05D000831 ORTHO05D000660 7.4e-07 56.6 59 54.2
HanXRQChr17g0542271 Helianthus annuus HOM05D000831 ORTHO05D000660 7.4e-07 56.6 60 60.0
Nn1g07825 Nelumbo nucifera HOM05D000831 ORTHO05D000660 7.4e-07 56.6 60 56.7
Nn1g07832 Nelumbo nucifera HOM05D000831 ORTHO05D000660 7.4e-07 56.6 60 56.7
Nn1g07835 Nelumbo nucifera HOM05D000831 ORTHO05D000660 7.4e-07 56.6 60 56.7
QL08p017375 Quercus lobata HOM05D000831 ORTHO05D000660 7.4e-07 56.6 58 55.2
QL08p017381 Quercus lobata HOM05D000831 ORTHO05D000660 7.4e-07 56.6 58 55.2
GSVIVG01029998001 Vitis vinifera HOM05D000831 ORTHO05D000660 7.4e-07 56.6 59 57.6
ECA246G2039 Erigeron canadensis HOM05D000831 ORTHO05D000660 9.7e-07 56.2 57 61.4
Glyma.12G200500 Glycine max HOM05D000831 ORTHO05D000660 9.7e-07 56.2 59 59.3
MBI02_g37329_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 9.7e-07 56.2 58 58.6
MBI02_g37331_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 9.7e-07 56.2 58 58.6
MBI02_g44823_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 9.7e-07 56.2 58 58.6
QL08p017355 Quercus lobata HOM05D000831 ORTHO05D000660 9.7e-07 56.2 58 55.2
CiPaw.03G169300 Carya illinoinensis HOM05D000831 ORTHO05D000660 1.3e-06 55.8 59 55.9
CiPaw.03G169400 Carya illinoinensis HOM05D000831 ORTHO05D000660 1.3e-06 55.8 59 55.9
Potri.019G116600 Populus trichocarpa HOM05D000831 ORTHO05D000660 1.3e-06 55.8 56 53.6
Prupe.3G230000 Prunus persica HOM05D000831 ORTHO05D000660 1.3e-06 55.8 59 54.2
QL08p037071 Quercus lobata HOM05D000831 ORTHO05D000660 1.7e-06 55.5 58 56.9
CiPaw.03G168500 Carya illinoinensis HOM05D000831 ORTHO05D000660 2.2e-06 55.1 59 59.3
Glyma.13G301700 Glycine max HOM05D000831 ORTHO05D000660 2.2e-06 55.1 59 59.3
MBI02_g37326_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 2.2e-06 55.1 64 50.0
MBI02_g37327_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 2.2e-06 55.1 60 56.7
Potri.019G117566 Populus trichocarpa HOM05D000831 ORTHO05D000660 2.2e-06 55.1 59 54.2
Rhsim04G0062800 Rhododendron simsii HOM05D000831 ORTHO05D000660 2.2e-06 55.1 59 59.3
TWI36G1218 Tripterygium wilfordii HOM05D000831 ORTHO05D000660 2.2e-06 55.1 59 54.2
TAR629G0014 Trochodendron aralioides HOM05D000831 ORTHO05D000660 2.2e-06 55.1 59 54.2
GSVIVG01030001001 Vitis vinifera HOM05D000831 ORTHO05D000660 2.2e-06 55.1 59 55.9
CAN.G508.8 Capsicum annuum HOM05D000831 ORTHO05D000660 2.8e-06 54.7 59 50.8
Cfa014535 Carpinus fangiana HOM05D000831 ORTHO05D000660 2.8e-06 54.7 59 57.6
CiPaw.03G168600 Carya illinoinensis HOM05D000831 ORTHO05D000660 2.8e-06 54.7 59 59.3
MBI02_g37334_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 2.8e-06 54.7 58 56.9
Nn1g00002 Nelumbo nucifera HOM05D000831 ORTHO05D000660 2.8e-06 54.7 59 54.2
Nn1g07821 Nelumbo nucifera HOM05D000831 ORTHO05D000660 2.8e-06 54.7 59 54.2
Nn1g07824 Nelumbo nucifera HOM05D000831 ORTHO05D000660 2.8e-06 54.7 59 54.2
Rhsim06G0152500 Rhododendron simsii HOM05D000831 ORTHO05D000660 2.8e-06 54.7 61 55.7
Cfa014532 Carpinus fangiana HOM05D000831 ORTHO05D000660 3.7e-06 54.3 59 57.6
HanXRQChr06g0171071 Helianthus annuus HOM05D000831 ORTHO05D000660 3.7e-06 54.3 60 58.3
MBI02_g37332_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 3.7e-06 54.3 58 55.2
Phvul.005G108300 Phaseolus vulgaris HOM05D000831 ORTHO05D000660 3.7e-06 54.3 59 57.6
QL08p017409 Quercus lobata HOM05D000831 ORTHO05D000660 3.7e-06 54.3 56 55.4
TAR629G0738 Trochodendron aralioides HOM05D000831 ORTHO05D000660 3.7e-06 54.3 59 54.2
AUR62029301 Chenopodium quinoa HOM05D000831 ORTHO05D000660 4.8e-06 53.9 56 58.9
Glyma.13G301800 Glycine max HOM05D000831 ORTHO05D000660 4.8e-06 53.9 59 57.6
Lsat_1_v5_gn_3_40481 Lactuca sativa HOM05D000831 ORTHO05D000660 4.8e-06 53.9 60 56.7
Nn1g07823 Nelumbo nucifera HOM05D000831 ORTHO05D000660 4.8e-06 53.9 59 54.2
Nn1g07830 Nelumbo nucifera HOM05D000831 ORTHO05D000660 4.8e-06 53.9 63 54.0
Potri.019G116700 Populus trichocarpa HOM05D000831 ORTHO05D000660 4.8e-06 53.9 55 56.4
Potri.019G117201 Populus trichocarpa HOM05D000831 ORTHO05D000660 4.8e-06 53.9 56 57.1
TAR627G0348 Trochodendron aralioides HOM05D000831 ORTHO05D000660 4.8e-06 53.9 59 54.2
TAR627G0747 Trochodendron aralioides HOM05D000831 ORTHO05D000660 4.8e-06 53.9 59 54.2
Ah.06g183460 Amaranthus hybridus HOM05D000831 ORTHO05D000660 6.3e-06 53.5 57 56.1
CiPaw.11G177700 Carya illinoinensis HOM05D000831 ORTHO05D000660 6.3e-06 53.5 60 58.3
Ciclev10017327m.g Citrus clementina HOM05D000831 ORTHO05D000660 6.3e-06 53.5 59 55.9
Glyma.13G301500 Glycine max HOM05D000831 ORTHO05D000660 6.3e-06 53.5 57 57.9
HanXRQChr06g0171091 Helianthus annuus HOM05D000831 ORTHO05D000660 6.3e-06 53.5 60 56.7
MBI02_g37328_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 6.3e-06 53.5 58 56.9
Nn1g07834 Nelumbo nucifera HOM05D000831 ORTHO05D000660 6.3e-06 53.5 63 54.0
Potri.019G117402 Populus trichocarpa HOM05D000831 ORTHO05D000660 6.3e-06 53.5 59 55.9
Potri.019G117500 Populus trichocarpa HOM05D000831 ORTHO05D000660 6.3e-06 53.5 59 55.9
Prupe.3G229900 Prunus persica HOM05D000831 ORTHO05D000660 6.3e-06 53.5 59 59.3
Sabra19G0108500 Salix brachista HOM05D000005 ORTHO05D000012 6.3e-06 53.5 54 53.7
Sabra19G0117800 Salix brachista HOM05D000831 ORTHO05D000660 6.3e-06 53.5 56 57.1
Sabra19G0135500 Salix brachista HOM05D000831 ORTHO05D000660 6.3e-06 53.5 59 55.9
Sabra19G0135600 Salix brachista HOM05D000831 ORTHO05D000660 6.3e-06 53.5 59 55.9
A05p24360 Brassica napus HOM05D000831 ORTHO05D000660 8.2e-06 53.1 59 55.9
BolC5t32539H Brassica oleracea HOM05D000831 ORTHO05D000660 8.2e-06 53.1 59 55.9
BraA05t21329Z Brassica rapa HOM05D000831 ORTHO05D000660 8.2e-06 53.1 59 55.9
Dinv13827 Davidia involucrata HOM05D000831 ORTHO05D000660 8.2e-06 53.1 59 54.2
Duzib052G1017 Durio zibethinus HOM05D000831 ORTHO05D000660 8.2e-06 53.1 56 55.4
Prupe.3G229400 Prunus persica HOM05D000831 ORTHO05D000660 8.2e-06 53.1 59 54.2
Solyc07g054770.1 Solanum lycopersicum HOM05D000831 ORTHO05D000660 8.2e-06 53.1 56 50.0
Thecc.02G171000 Theobroma cacao HOM05D000831 ORTHO05D000660 8.2e-06 53.1 52 55.8
TAR627G0398 Trochodendron aralioides HOM05D000831 ORTHO05D000660 8.2e-06 53.1 59 52.5
TAR627G1040 Trochodendron aralioides HOM05D000831 ORTHO05D000660 8.2e-06 53.1 59 52.5


User provided reference genes

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