Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 2.3e-99 365.5 181 100.0
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 1.0e-59 233.8 133 88.7
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 1.7e-49 199.9 137 68.6
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 7.0e-48 194.5 137 66.4
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-35 153.7 137 56.2
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 3.0e-30 136.0 126 56.3
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 1.1e-29 134.0 131 53.4
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 2.5e-29 132.9 131 52.7
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 9.5e-29 131.0 139 46.0
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 1.2e-28 130.6 137 46.7
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-28 128.3 139 45.3
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-28 127.9 137 45.3
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-28 127.9 137 46.0
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 4.0e-27 125.6 106 56.6
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.0e-27 125.6 137 44.5
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 5.2e-27 125.2 137 46.0
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-27 125.2 137 45.3
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-26 123.2 137 44.5
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.0e-26 123.2 138 44.2
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-26 123.2 137 45.3
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.0e-26 123.2 137 43.8
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 2.6e-26 122.9 137 42.3
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-26 122.9 137 46.0
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 2.6e-26 122.9 133 45.9
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-25 120.6 123 48.8
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.2e-25 119.8 137 43.8
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-25 119.4 137 43.1
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.7e-25 119.0 137 43.1
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-25 118.2 135 45.9
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 6.4e-25 118.2 98 58.2
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-25 117.9 139 42.4
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.9e-24 116.7 137 41.6
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 1.9e-24 116.7 132 46.2
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 2.4e-24 116.3 137 41.6
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.2e-24 115.9 138 42.0
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-24 115.9 137 42.3
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-24 115.5 134 44.0
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 4.1e-24 115.5 137 42.3
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.4e-24 115.2 138 42.8
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-23 114.0 134 43.3
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-23 112.5 135 37.8
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-23 111.3 134 42.5
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 7.8e-23 111.3 137 40.9
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 1.0e-22 110.9 97 55.7
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.3e-22 109.8 137 42.3
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-22 109.4 137 42.3
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 3.0e-22 109.4 130 43.8
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 3.9e-22 109.0 120 45.8
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-22 108.6 135 40.7
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.5e-21 107.1 107 46.7
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 2.5e-21 106.3 133 45.1
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-20 104.0 137 41.6
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-20 102.8 137 38.7
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-20 102.8 137 40.9
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-20 102.8 137 40.9
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-20 102.1 133 42.1
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-19 99.8 124 41.9
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 9.9e-18 94.4 137 38.7
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 9.9e-18 94.4 137 39.4
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 9.9e-18 94.4 137 37.2
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 9.9e-18 94.4 137 39.4
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.7e-17 92.4 126 38.9
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 3.7e-17 92.4 137 38.7
PGR044G1025 Punica granatum HOM05D000097 ORTHO05D000041 4.9e-17 92.0 94 54.3
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 1.1e-16 90.9 59 71.2
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 1.9e-16 90.1 110 45.5
PGR044G2365 Punica granatum HOM05D000097 ORTHO05D000041 1.9e-16 90.1 84 56.0
PGR044G0355 Punica granatum HOM05D000097 ORTHO05D000041 3.2e-16 89.4 83 54.2
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 4.1e-16 89.0 123 39.8
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.2e-16 87.8 112 41.1
PGR044G1072 Punica granatum HOM05D000097 ORTHO05D000041 1.6e-15 87.0 85 56.5
PGR044G1153 Punica granatum HOM05D000097 ORTHO05D000041 1.6e-15 87.0 85 56.5
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-15 87.0 134 37.3
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 1.6e-15 87.0 83 53.0
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 2.1e-15 86.7 94 43.6
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 7.8e-15 84.7 136 39.7
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.3e-14 83.2 128 37.5
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 3.0e-14 82.8 90 45.6
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 1.5e-13 80.5 107 43.9
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 1.5e-13 80.5 105 40.0
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-13 80.5 94 42.6
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 3.3e-13 79.3 107 42.1
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 3.3e-13 79.3 107 37.4
Nn5g30038 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.6e-13 78.6 91 41.8
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 5.6e-13 78.6 96 45.8
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 9.6e-13 77.8 87 42.5
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 2.1e-12 76.6 139 35.3
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 3.6e-12 75.9 88 43.2
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-11 74.3 128 33.6
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-11 74.3 86 43.0
Thhalv10000559m.g Eutrema salsugineum HOM05D008571 ORTHO05D004433 3.1e-11 72.8 52 65.4
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 3.1e-11 72.8 94 41.5
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-11 72.4 135 31.1
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 4.0e-11 72.4 83 43.4
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 4.0e-11 72.4 86 39.5
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 6.8e-11 71.6 69 50.7
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 1.2e-10 70.9 137 31.4
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 2.6e-10 69.7 133 32.3
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.4e-10 68.9 90 41.1
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.4e-10 68.9 90 41.1
Thecc.03G106900 Theobroma cacao HOM05D000002 ORTHO05D004433 4.4e-10 68.9 91 37.4
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-10 68.6 90 42.2
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 7.6e-10 68.2 90 40.0
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.6e-10 68.2 79 44.3
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 1.3e-09 67.4 78 37.2
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-09 67.4 123 31.7
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 1.7e-09 67.0 77 41.6
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-09 66.6 137 30.7
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 4.9e-09 65.5 108 36.1
Sopen05g013900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-09 65.5 48 56.2
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-09 65.1 60 51.7
Sopen10g024020 Solanum pennellii HOM05D008571 ORTHO05D011280 8.4e-09 64.7 98 37.8
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-08 64.3 60 50.0
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-08 63.9 66 45.5
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.4e-08 63.9 81 39.5
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 3.2e-08 62.8 110 32.7
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.2e-08 62.8 78 38.5
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 3.2e-08 62.8 48 58.3
PGSC0003DMG400033163 Solanum tuberosum HOM05D000002 ORTHO05D004433 5.4e-08 62.0 79 35.4
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 9.3e-08 61.2 64 48.4
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 9.3e-08 61.2 91 36.3
RcHm_v2.0_Chr7g0230661 Rosa chinensis HOM05D000097 ORTHO05D000041 1.2e-07 60.8 92 37.0
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 2.1e-07 60.1 121 23.1
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-07 59.7 65 44.6
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-07 59.7 66 43.9
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 4.6e-07 58.9 66 43.9
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 1.0e-06 57.8 124 32.3
Dinv25833 Davidia involucrata HOM05D000097 ORTHO05D000041 1.7e-06 57.0 71 40.8
Glyma.01G070601 Glycine max HOM05D000002 ORTHO05D004433 1.7e-06 57.0 83 36.1
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 1.7e-06 57.0 122 24.6
FAN04G1606 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.3e-06 56.6 75 37.3
FAN04G1975 Fragaria x ananassa HOM05D001790 ORTHO05D007425 2.3e-06 56.6 75 37.3
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-06 56.6 66 42.4
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 3.0e-06 56.2 56 46.4
PGSC0003DMG400023646 Solanum tuberosum HOM05D000002 ORTHO05D004433 3.0e-06 56.2 100 34.0
Dinv02177 Davidia involucrata HOM05D000002 ORTHO05D004433 3.9e-06 55.8 86 34.9
FAN18G4446 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.9e-06 55.8 74 37.8
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 3.9e-06 55.8 79 34.2
Dinv06735 Davidia involucrata HOM05D000002 ORTHO05D000001 5.1e-06 55.5 140 25.7
FvH4_5g35840 Fragaria vesca HOM05D000097 ORTHO05D000041 5.1e-06 55.5 80 35.0
CAN.G350.7 Capsicum annuum HOM05D000002 ORTHO05D004433 6.6e-06 55.1 67 38.8
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.7e-06 54.7 142 26.8
Sopen09g023820 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-06 54.7 147 27.9


User provided reference genes

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