Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 1.4e-63 246.1 123 100.0
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 3.4e-22 108.6 134 53.7
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 3.4e-22 108.6 134 53.7
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 4.5e-22 108.2 141 52.5
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 1.7e-21 106.3 127 51.2
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 5.5e-20 101.3 141 48.2
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 9.3e-20 100.5 131 48.9
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 1.2e-19 100.1 142 49.3
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.6e-19 99.8 129 50.4
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 4.6e-19 98.2 141 47.5
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 4.6e-19 98.2 136 52.2
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 6.1e-19 97.8 132 47.0
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 7.9e-19 97.4 112 54.5
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 7.9e-19 97.4 123 49.6
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 2.3e-18 95.9 133 51.1
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 3.9e-18 95.1 142 45.1
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 5.1e-18 94.7 131 48.9
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 8.8e-18 94.0 132 49.2
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.5e-17 93.2 142 46.5
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.9e-17 92.8 131 48.1
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.5e-17 92.4 131 49.6
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 3.3e-17 92.0 129 49.6
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.3e-17 91.7 130 46.9
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 5.7e-17 91.3 98 55.1
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 9.7e-17 90.5 119 52.9
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 1.3e-16 90.1 146 43.2
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.7e-16 88.6 131 47.3
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 6.3e-16 87.8 131 47.3
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 2.4e-15 85.9 131 48.1
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 5.3e-15 84.7 131 48.1
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 5.3e-15 84.7 125 46.4
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 9.1e-15 84.0 137 45.3
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 1.2e-14 83.6 117 53.0
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 2.0e-14 82.8 103 54.4
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 3.4e-14 82.0 118 51.7
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 3.4e-14 82.0 139 42.4
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 3.4e-14 82.0 132 43.2
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 4.5e-14 81.6 122 45.9
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 5.9e-14 81.3 101 55.4
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 1.0e-13 80.5 104 46.2
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 1.3e-13 80.1 137 44.5
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 1.3e-13 80.1 126 43.7
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 1.7e-13 79.7 135 43.0
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 1.7e-13 79.7 127 47.2
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.7e-13 79.7 139 44.6
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 2.2e-13 79.3 130 46.2
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 2.2e-13 79.3 137 43.8
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 2.9e-13 79.0 117 51.3
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 3.8e-13 78.6 103 47.6
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.9e-12 76.3 118 46.6
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.5e-12 75.9 119 47.1
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 2.5e-12 75.9 127 45.7
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 2.5e-12 75.9 124 42.7
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 5.5e-12 74.7 142 39.4
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 7.2e-12 74.3 137 43.1
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.2e-11 73.6 118 45.8
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 1.2e-11 73.6 104 47.1
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.6e-11 73.2 94 52.1
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.6e-11 73.2 94 52.1
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 3.6e-11 72.0 99 48.5
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 1.4e-10 70.1 102 48.0
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 3.0e-10 68.9 121 44.6
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 3.9e-10 68.6 94 51.1
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 3.9e-10 68.6 107 43.9
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 5.1e-10 68.2 127 42.5
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 1.5e-09 66.6 107 42.1
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 3.3e-09 65.5 107 42.1
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 4.4e-09 65.1 117 39.3
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 4.4e-09 65.1 117 39.3
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 1.3e-08 63.5 113 39.8
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 1.7e-08 63.2 123 39.8
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 2.2e-08 62.8 94 40.4
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 3.7e-08 62.0 102 45.1
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 4.8e-08 61.6 138 31.9
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 8.2e-08 60.8 112 39.3
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 1.1e-07 60.5 111 37.8
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 1.8e-07 59.7 137 38.0
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 2.4e-07 59.3 91 47.3
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 4.1e-07 58.5 87 46.0
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 5.3e-07 58.2 126 39.7
Potri.006G052300 Populus trichocarpa HOM05D007398 ORTHO05D004912 1.2e-06 57.0 122 39.3
SEGI_01426 Sequoiadendron giganteum HOM05D007398 ORTHO05D004912 1.5e-06 56.6 79 50.6
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 2.0e-06 56.2 131 37.4
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 2.0e-06 56.2 91 45.1
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 2.0e-06 56.2 94 40.4
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 2.6e-06 55.8 114 39.5
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 2.6e-06 55.8 123 37.4
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 2.6e-06 55.8 135 35.6
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.4e-06 55.5 98 42.9
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 4.5e-06 55.1 107 42.1


User provided reference genes

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