Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 6.0e-253 877.1 461 100.0
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 1.8e-156 556.6 413 65.1
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.1e-150 537.3 400 64.8
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 1.2e-147 527.3 409 63.8
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 5.8e-147 525.0 383 66.8
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 5.8e-147 525.0 409 63.1
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 2.2e-146 523.1 408 63.5
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 3.7e-146 522.3 382 65.4
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 4.9e-146 521.9 427 60.7
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 6.4e-146 521.5 400 63.2
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 9.2e-145 517.7 419 61.6
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 1.0e-143 514.2 394 64.2
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 3.9e-143 512.3 413 62.2
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 5.0e-143 511.9 410 61.2
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 1.1e-142 510.8 427 60.9
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 1.9e-142 510.0 418 61.7
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 4.3e-142 508.8 393 63.4
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 4.3e-142 508.8 397 63.7
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 4.3e-142 508.8 417 61.4
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 7.3e-142 508.1 410 62.9
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 7.3e-142 508.1 395 62.8
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 9.5e-142 507.7 414 61.8
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.6e-141 506.9 394 63.7
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 4.7e-141 505.4 422 59.2
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 4.7e-141 505.4 355 67.0
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 3.1e-140 502.7 411 62.8
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 5.2e-140 501.9 393 62.8
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 8.9e-140 501.1 395 61.3
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 8.9e-140 501.1 338 69.8
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 8.9e-140 501.1 436 58.3
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 8.9e-140 501.1 436 58.3
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 2.0e-139 500.0 400 61.5
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 3.4e-139 499.2 421 60.3
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 4.4e-139 498.8 415 61.0
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 9.8e-139 497.7 401 62.3
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 2.2e-138 496.5 394 64.2
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 2.9e-138 496.1 362 66.0
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 3.7e-138 495.7 448 56.9
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 3.7e-138 495.7 414 60.6
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 4.9e-138 495.4 423 57.9
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 8.3e-138 494.6 392 62.5
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 8.3e-138 494.6 396 59.3
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 1.9e-137 493.4 395 61.8
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 1.9e-137 493.4 391 60.1
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 2.4e-137 493.0 407 62.9
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 2.4e-137 493.0 407 63.1
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 2.4e-137 493.0 392 62.5
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 2.4e-137 493.0 393 60.1
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 3.2e-137 492.7 416 59.4
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 5.4e-137 491.9 407 60.9
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 5.4e-137 491.9 398 60.8
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 5.4e-137 491.9 340 65.9
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 9.2e-137 491.1 397 62.2
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 1.6e-136 490.3 412 60.4
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 1.6e-136 490.3 397 62.2
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 1.6e-136 490.3 382 62.8
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 2.7e-136 489.6 424 57.3
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 6.0e-136 488.4 407 59.7
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 7.8e-136 488.0 448 54.5
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 1.0e-135 487.6 406 58.4
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 1.0e-135 487.6 411 60.3
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 1.7e-135 486.9 410 58.8
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.3e-135 486.5 406 58.1
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 2.3e-135 486.5 414 60.1
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 2.3e-135 486.5 367 64.3
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 6.6e-135 485.0 394 61.4
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 2.5e-134 483.0 355 64.5
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 3.3e-134 482.6 386 63.0
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 5.6e-134 481.9 377 61.3
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 5.6e-134 481.9 396 59.1
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.8e-133 479.6 406 57.6
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 2.3e-132 476.5 415 57.6
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 4.0e-132 475.7 394 58.6
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 5.2e-132 475.3 340 65.3
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 6.8e-132 474.9 377 59.4
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 8.9e-132 474.6 425 58.1
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 4.4e-131 472.2 355 64.2
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 5.8e-131 471.9 377 59.7
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 9.9e-131 471.1 377 58.9
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 9.9e-131 471.1 353 62.3
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 1.3e-130 470.7 386 58.5
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 1.7e-130 470.3 402 58.2
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 2.2e-130 469.9 418 57.2
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 3.8e-130 469.2 355 64.2
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 4.9e-130 468.8 415 58.8
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 6.4e-130 468.4 357 63.6
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 8.4e-130 468.0 401 59.1
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 1.1e-129 467.6 321 69.2
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 1.9e-129 466.8 407 56.5
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 3.2e-129 466.1 411 57.7
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 7.1e-129 464.9 413 57.6
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 7.1e-129 464.9 362 59.9
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 1.2e-128 464.2 391 57.5
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 2.1e-128 463.4 378 58.5
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 4.6e-128 462.2 429 53.8
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 1.0e-127 461.1 413 55.2
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 8.6e-127 458.0 365 59.7
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 8.6e-127 458.0 365 59.7
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 1.9e-126 456.8 413 55.0
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 5.6e-126 455.3 362 59.9
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 5.6e-126 455.3 387 60.2
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 2.1e-125 453.4 384 57.0
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 2.1e-125 453.4 387 59.9
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 8.1e-125 451.4 367 59.9
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 1.8e-124 450.3 362 58.8
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 5.2e-124 448.7 401 55.6
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 3.4e-123 446.0 345 60.9
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 6.0e-120 435.3 425 52.2
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.1e-117 426.8 395 56.7
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 2.8e-117 426.4 355 59.2
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 4.8e-117 425.6 358 58.4
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.5e-115 420.6 462 50.4
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 1.3e-114 417.5 416 54.1
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 2.4e-113 413.3 418 50.0
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 5.6e-110 402.1 423 52.0
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.1e-109 400.2 344 59.6
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 1.1e-108 397.9 360 53.1
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 5.8e-107 392.1 411 49.9
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 3.8e-106 389.4 332 58.7
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.8e-106 389.4 425 50.8
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 3.7e-101 372.9 291 62.2
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 1.2e-99 367.9 291 58.8
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 3.8e-98 362.8 322 55.9
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 3.2e-97 359.8 286 60.5
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 3.7e-93 346.3 293 58.4
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 5.3e-92 342.4 292 58.2
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 1.2e-91 341.3 413 48.2
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 1.6e-85 320.9 448 42.6
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 2.2e-85 320.5 295 53.2
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 1.2e-83 314.7 398 44.0
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.2e-82 310.5 299 53.8
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 3.2e-81 306.6 379 46.2
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.8e-76 290.8 409 43.8
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 3.5e-67 260.0 177 66.7
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 1.3e-66 258.1 365 41.9
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 8.5e-58 228.8 320 41.6
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 1.9e-57 227.6 303 41.6
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 9.4e-57 225.3 228 53.1
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.8e-55 221.1 175 65.7
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 2.1e-48 197.6 345 38.3
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 2.1e-48 197.6 345 38.3
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 3.0e-47 193.7 410 32.4
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 8.3e-45 185.7 129 65.1
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.1e-44 185.3 230 45.2
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 9.8e-38 162.2 367 32.2
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.0e-31 140.2 290 33.4
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 6.6e-26 122.9 382 26.2
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 8.1e-24 115.9 369 27.1
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.2e-20 104.0 105 51.4
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 3.0e-18 97.4 181 32.0
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 4.3e-17 93.6 67 62.7
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.6e-16 91.7 53 81.1
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 1.4e-15 88.6 78 57.7
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 1.4e-15 88.6 78 57.7
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.8e-15 88.2 81 53.1
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 1.5e-14 85.1 75 57.3
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 2.8e-08 64.3 41 75.6


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