Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 5.8e-39 163.7 79 100.0
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 5.6e-26 120.6 99 67.7
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 1.4e-24 115.9 98 65.3
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 8.4e-14 80.1 96 50.0
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.1e-13 79.7 97 50.5
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 1.9e-13 79.0 99 52.5
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 4.2e-13 77.8 103 49.5
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 5.4e-13 77.4 99 48.5
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 9.3e-13 76.6 97 48.5
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 1.6e-12 75.9 97 48.5
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 2.7e-12 75.1 105 47.6
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 3.5e-12 74.7 92 50.0
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 4.6e-12 74.3 88 50.0
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 7.9e-12 73.6 88 46.6
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 7.9e-12 73.6 76 52.6
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 7.9e-12 73.6 80 52.5
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 7.9e-12 73.6 105 47.6
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 7.9e-12 73.6 105 47.6
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 7.9e-12 73.6 78 52.6
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 1.8e-11 72.4 99 49.5
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.3e-11 72.0 82 50.0
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 2.3e-11 72.0 101 44.6
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 3.0e-11 71.6 79 50.6
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 3.0e-11 71.6 101 44.6
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.0e-11 71.6 109 45.9
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 3.9e-11 71.2 101 45.5
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 3.9e-11 71.2 99 49.5
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 5.1e-11 70.9 82 48.8
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 4.3e-10 67.8 107 45.8
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 4.3e-10 67.8 96 45.8
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 4.3e-10 67.8 71 54.9
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 5.6e-10 67.4 100 44.0
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 7.4e-10 67.0 74 51.4
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 7.4e-10 67.0 85 50.6
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 9.6e-10 66.6 101 43.6
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 1.3e-09 66.2 84 50.0
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 1.3e-09 66.2 84 50.0
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 1.6e-09 65.9 77 51.9
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 2.1e-09 65.5 76 50.0
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 2.1e-09 65.5 81 46.9
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 2.8e-09 65.1 72 52.8
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 2.8e-09 65.1 102 43.1
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 3.7e-09 64.7 78 51.3
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 3.7e-09 64.7 93 46.2
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 3.7e-09 64.7 28 100.0
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 3.7e-09 64.7 91 46.2
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 6.2e-09 63.9 102 42.2
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 6.2e-09 63.9 96 44.8
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 8.1e-09 63.5 28 96.4
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 8.1e-09 63.5 28 96.4
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 8.1e-09 63.5 28 96.4
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 8.1e-09 63.5 28 96.4
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 8.1e-09 63.5 28 96.4
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 1.1e-08 63.2 27 96.3
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 1.4e-08 62.8 60 56.7
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 1.8e-08 62.4 28 92.9
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.8e-08 62.4 28 92.9
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.8e-08 62.4 28 92.9
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.8e-08 62.4 28 92.9
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.8e-08 62.4 28 92.9
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 1.8e-08 62.4 76 48.7
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 1.8e-08 62.4 26 100.0
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 1.8e-08 62.4 28 92.9
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 1.8e-08 62.4 28 92.9
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 2.4e-08 62.0 76 50.0
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.4e-08 62.0 28 92.9
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.4e-08 62.0 28 92.9
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 2.4e-08 62.0 28 92.9
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 2.4e-08 62.0 57 57.9
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 2.4e-08 62.0 70 48.6
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 3.1e-08 61.6 28 92.9
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 3.1e-08 61.6 28 92.9
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 3.1e-08 61.6 28 92.9
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 3.1e-08 61.6 28 92.9
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 3.1e-08 61.6 28 92.9
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 3.1e-08 61.6 28 92.9
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 3.1e-08 61.6 27 92.6
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 3.1e-08 61.6 28 92.9
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 4.0e-08 61.2 26 96.2
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 4.0e-08 61.2 26 96.2
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 4.0e-08 61.2 26 96.2
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 4.0e-08 61.2 89 46.1
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 4.0e-08 61.2 26 96.2
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 5.3e-08 60.8 105 41.0
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 5.3e-08 60.8 26 96.2
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 6.9e-08 60.5 28 89.3
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 6.9e-08 60.5 28 89.3
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 6.9e-08 60.5 28 89.3
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 6.9e-08 60.5 28 89.3
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 9.0e-08 60.1 28 89.3
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 9.0e-08 60.1 28 89.3
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 9.0e-08 60.1 28 89.3
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 9.0e-08 60.1 26 92.3
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.2e-07 59.7 27 88.9
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 1.5e-07 59.3 26 92.3
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 2.0e-07 58.9 27 88.9
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 2.0e-07 58.9 26 92.3
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 5.8e-07 57.4 26 92.3
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.3e-06 56.2 26 84.6
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.3e-06 56.2 26 84.6
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 4.9e-06 54.3 26 84.6
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 8.4e-06 53.5 25 76.0


User provided reference genes

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