Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 1.6e-36 155.6 82 100.0
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 6.0e-15 84.0 86 60.5
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.1e-11 73.2 86 51.2
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 2.4e-11 72.0 83 48.2
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 9.0e-11 70.1 81 54.3
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 1.2e-10 69.7 79 53.2
CiPaw.03G159600 Carya illinoinensis HOM05D007037 ORTHO05D006691 3.4e-10 68.2 73 53.4
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.5e-10 67.8 81 53.1
DCAR_019271 Daucus carota HOM05D007037 ORTHO05D006691 5.8e-10 67.4 82 50.0
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 7.6e-10 67.0 82 53.7
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.6e-10 67.0 76 52.6
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.6e-10 67.0 76 52.6
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.2e-09 65.5 80 48.8
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.9e-09 65.1 80 48.8
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 5.0e-09 64.3 84 50.0
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 5.0e-09 64.3 83 44.6
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 6.5e-09 63.9 81 46.9
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 1.1e-08 63.2 83 44.6
CSS0005463 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.4e-08 62.8 92 45.7
ECA236G1425 Erigeron canadensis HOM05D007037 ORTHO05D006691 2.5e-08 62.0 83 44.6
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 2.5e-08 62.0 83 43.4
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 4.2e-08 61.2 85 49.4
Zm00001eb048920 Zea mays HOM05D007037 ORTHO05D006691 4.2e-08 61.2 80 47.5
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 9.3e-08 60.1 80 43.8
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.2e-07 59.7 81 45.7
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 1.2e-07 59.7 75 50.7
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 1.2e-07 59.7 86 48.8
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 1.2e-07 59.7 80 46.2
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 1.2e-07 59.7 82 45.1
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 1.2e-07 59.7 83 47.0
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 1.6e-07 59.3 84 46.4
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 2.1e-07 58.9 84 46.4
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 2.1e-07 58.9 85 43.5
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 2.7e-07 58.5 85 43.5
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 3.5e-07 58.2 83 44.6
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 3.5e-07 58.2 83 44.6
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 4.6e-07 57.8 84 45.2
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 4.6e-07 57.8 83 45.8
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 7.9e-07 57.0 72 47.2
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 7.9e-07 57.0 83 47.0
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 1.0e-06 56.6 80 45.0
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.0e-06 56.6 74 44.6
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 1.0e-06 56.6 82 43.9
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 1.0e-06 56.6 80 45.0
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 1.0e-06 56.6 85 42.4
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 1.0e-06 56.6 75 49.3
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 1.3e-06 56.2 80 37.5
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 2.3e-06 55.5 71 49.3
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 3.0e-06 55.1 75 48.0
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 3.0e-06 55.1 84 42.9
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 3.0e-06 55.1 71 50.7
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 3.9e-06 54.7 82 42.7
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 5.1e-06 54.3 82 41.5
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 6.7e-06 53.9 77 48.1
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 6.7e-06 53.9 81 40.7
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 6.7e-06 53.9 79 44.3
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 6.7e-06 53.9 84 47.6
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 8.7e-06 53.5 81 44.4
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 8.7e-06 53.5 84 46.4
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 8.7e-06 53.5 82 41.5
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 8.7e-06 53.5 81 44.4


User provided reference genes

Program Settings