Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 2.9e-125 451.8 217 100.0
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.2e-105 386.7 184 100.0
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 3.1e-103 378.6 184 97.3
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.9e-68 263.1 188 66.0
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 3.3e-68 262.3 168 72.0
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 2.8e-67 259.2 173 71.1
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 3.6e-67 258.8 171 70.2
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 4.0e-66 255.4 175 68.6
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 4.4e-65 251.9 182 64.3
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 2.2e-64 249.6 171 68.4
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 3.8e-64 248.8 166 68.7
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 4.9e-64 248.4 164 70.1
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 1.1e-63 247.3 200 59.5
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 2.4e-63 246.1 168 64.9
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 9.2e-63 244.2 169 65.7
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 3.5e-62 242.3 170 66.5
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.0e-61 240.7 168 68.5
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 1.3e-61 240.4 167 65.3
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 2.3e-61 239.6 169 66.9
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 3.9e-61 238.8 174 63.8
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 5.1e-61 238.4 172 61.0
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 1.1e-60 237.3 169 65.7
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 3.3e-60 235.7 167 66.5
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 7.3e-60 234.6 166 67.5
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 9.6e-60 234.2 166 66.3
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.2e-59 233.8 175 61.7
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 3.6e-59 232.3 173 63.0
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.7e-59 231.9 163 65.0
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 4.7e-59 231.9 170 63.5
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 8.1e-59 231.1 166 65.1
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 8.1e-59 231.1 165 66.1
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 8.1e-59 231.1 163 65.0
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 8.1e-59 231.1 167 62.3
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 2.4e-58 229.6 168 64.3
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 5.2e-58 228.4 182 60.4
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 6.9e-58 228.0 163 64.4
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 6.9e-58 228.0 170 64.1
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 6.9e-58 228.0 170 61.2
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 6.9e-58 228.0 173 62.4
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 8.9e-58 227.6 179 61.5
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 1.2e-57 227.3 164 64.6
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 3.4e-57 225.7 170 58.2
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 4.4e-57 225.3 168 62.5
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.8e-57 224.9 161 65.2
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 7.6e-57 224.6 161 65.2
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 1.3e-56 223.8 181 58.0
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.7e-56 223.4 170 61.2
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 2.2e-56 223.0 181 55.8
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 4.9e-56 221.9 169 59.8
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 8.4e-56 221.1 177 57.1
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.1e-55 220.7 169 60.4
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.9e-55 219.9 181 56.9
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.9e-55 219.9 168 60.1
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 4.2e-55 218.8 166 62.0
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 4.2e-55 218.8 163 62.6
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 5.4e-55 218.4 166 62.7
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 7.1e-55 218.0 166 62.7
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.2e-54 217.2 162 60.5
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.6e-54 216.9 182 59.3
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 2.7e-54 216.1 161 60.2
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 3.5e-54 215.7 188 55.9
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 4.6e-54 215.3 182 58.8
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 7.8e-54 214.5 165 59.4
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 1.0e-53 214.2 164 60.4
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 1.3e-53 213.8 185 56.2
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.7e-53 213.4 172 58.7
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.9e-53 212.2 179 58.7
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 5.1e-53 211.8 183 52.5
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 5.1e-53 211.8 182 56.6
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 1.8e-50 203.4 168 58.3
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 1.8e-50 203.4 173 56.1
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 2.4e-50 203.0 168 56.0
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 1.2e-49 200.7 167 54.5
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.5e-49 200.3 170 57.6
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 2.0e-49 199.9 164 56.7
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 2.6e-49 199.5 162 57.4
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 3.4e-49 199.1 170 53.5
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 1.3e-48 197.2 166 53.6
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.3e-48 197.2 172 52.3
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.7e-48 196.8 165 54.5
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.7e-48 196.8 163 56.4
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 2.9e-48 196.1 170 57.1
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 2.9e-48 196.1 170 57.1
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 2.9e-48 196.1 164 55.5
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 1.1e-47 194.1 160 54.4
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 1.4e-47 193.7 165 54.5
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.9e-47 193.4 167 56.3
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 9.3e-47 191.0 170 52.9
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 1.2e-46 190.7 177 50.3
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.7e-46 189.5 168 53.6
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.7e-46 189.5 167 53.3
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 2.7e-46 189.5 165 55.2
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 3.5e-46 189.1 170 55.3
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 7.9e-46 188.0 163 55.2
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 1.8e-45 186.8 164 52.4
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 3.9e-45 185.7 171 52.6
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 6.7e-45 184.9 182 49.5
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.5e-44 183.7 165 52.1
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 1.5e-44 183.7 170 50.6
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 9.6e-44 181.0 142 60.6
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 8.1e-43 177.9 169 52.7
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 1.4e-39 167.2 165 47.3
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 3.2e-39 166.0 132 59.1
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 1.6e-38 163.7 168 47.0
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 4.6e-38 162.2 166 46.4
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 6.0e-38 161.8 165 48.5
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 4.3e-36 155.6 164 47.0
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 4.3e-36 155.6 164 47.0
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 7.4e-36 154.8 164 47.0
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.5e-28 130.6 175 38.9
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 3.3e-28 129.4 169 39.1
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 4.3e-28 129.0 163 38.0
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 3.1e-18 96.3 167 32.3
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 9.4e-15 84.7 68 61.8
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 2.2e-11 73.6 119 37.8
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 4.8e-11 72.4 83 43.4
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 2.4e-10 70.1 175 26.9
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 3.1e-10 69.7 186 26.3
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 4.1e-10 69.3 95 34.7
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 2.6e-09 66.6 108 37.0
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 5.9e-09 65.5 158 29.7
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 1.7e-08 63.9 152 30.9
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 2.2e-08 63.5 53 56.6
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.9e-08 63.2 35 71.4


User provided reference genes

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