Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g03920 Coffea canephora HOM05D008698 ORTHO05D010072 1.9e-37 159.8 181 100.0
PGR083G1635 Punica granatum HOM05D008698 ORTHO05D010072 1.0e-14 84.3 189 61.9
Rhsim03G0068200 Rhododendron simsii HOM05D008698 ORTHO05D010072 2.1e-12 76.6 190 62.1
Actinidia31735 Actinidia chinensis HOM05D008698 ORTHO05D010072 2.0e-10 70.1 172 72.7
Dinv43522 Davidia involucrata HOM05D008698 ORTHO05D010072 7.6e-10 68.2 180 63.9
Dinv43963 Davidia involucrata HOM05D008698 ORTHO05D010072 9.9e-10 67.8 195 69.7
Actinidia21589 Actinidia chinensis HOM05D005695 ORTHO05D007810 1.1e-08 64.3 133 66.2
Sc23g0004570 Simmondsia chinensis HOM05D008698 ORTHO05D010072 1.1e-08 64.3 183 60.1
Prupe.2G106300 Prunus persica HOM05D008698 ORTHO05D010072 3.2e-08 62.8 181 64.6
CSS0001446 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 5.4e-08 62.0 126 68.3
MD02G1232500 Malus domestica HOM05D018025 ORTHO05D020667 5.4e-08 62.0 189 63.5
vmacro21117 Vaccinium macrocarpon HOM05D008698 ORTHO05D010072 1.2e-07 60.8 177 67.8
Eucgr.L01353 Eucalyptus grandis HOM05D008698 ORTHO05D010072 6.0e-07 58.5 84 56.0
Eucgr.D01072 Eucalyptus grandis HOM05D008698 ORTHO05D010072 1.0e-06 57.8 84 54.8
Thecc.05G234300 Theobroma cacao HOM05D008698 ORTHO05D010072 2.3e-06 56.6 184 62.0
GSVIVG01019304001 Vitis vinifera HOM05D008698 ORTHO05D010072 5.1e-06 55.5 197 57.9


User provided reference genes

Program Settings