Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g03510 Coffea canephora HOM05D000022 ORTHO05D153871 3.7e-28 127.5 64 100.0
Cc05_g03560 Coffea canephora HOM05D000022 ORTHO05D000071 7.7e-26 119.8 64 95.3
Cc05_g03530 Coffea canephora HOM05D000022 ORTHO05D000071 1.6e-23 112.1 64 89.1
Cc05_g03880 Coffea canephora HOM05D000022 ORTHO05D000071 8.3e-20 99.8 64 82.8
Cc05_g03550 Coffea canephora HOM05D000022 ORTHO05D000071 7.0e-19 96.7 64 76.6
Cc00_g31510 Coffea canephora HOM05D000022 ORTHO05D000071 2.7e-18 94.7 64 73.4
Cc05_g03540 Coffea canephora HOM05D000022 ORTHO05D000071 7.8e-18 93.2 64 75.0
Cc00_g21490 Coffea canephora HOM05D000022 ORTHO05D000071 2.3e-17 91.7 64 71.9
Cc05_g03870 Coffea canephora HOM05D000022 ORTHO05D000071 2.3e-17 91.7 64 75.0
Cc05_g03480 Coffea canephora HOM05D000022 ORTHO05D005575 5.6e-16 87.0 64 68.8
Cc11_g14770 Coffea canephora HOM05D000022 ORTHO05D000071 5.6e-16 87.0 63 68.3
QL05p076474 Quercus lobata HOM05D000022 ORTHO05D000071 1.2e-07 59.3 65 55.4
Eucgr.E03765 Eucalyptus grandis HOM05D000022 ORTHO05D000071 2.8e-07 58.2 64 51.6
QL12p029661 Quercus lobata HOM05D000022 ORTHO05D000071 6.2e-07 57.0 65 55.4
Thecc.06G209900 Theobroma cacao HOM05D000022 ORTHO05D000071 1.4e-06 55.8 74 50.0
TWI38G1041 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 2.3e-06 55.1 65 52.3
Cc00_g17310 Coffea canephora HOM05D000022 ORTHO05D000071 3.1e-06 54.7 64 50.0
Eucgr.E04152 Eucalyptus grandis HOM05D000022 ORTHO05D000071 3.1e-06 54.7 64 48.4
QL10p044882 Quercus lobata HOM05D000022 ORTHO05D000071 3.1e-06 54.7 68 44.1
Eucgr.E03766 Eucalyptus grandis HOM05D000022 ORTHO05D000071 4.0e-06 54.3 64 48.4
Gohir.A06G121300 Gossypium hirsutum HOM05D000022 ORTHO05D000071 4.0e-06 54.3 65 47.7
Gohir.D06G125500 Gossypium hirsutum HOM05D000022 ORTHO05D000071 4.0e-06 54.3 65 47.7
Gorai.010G146100 Gossypium raimondii HOM05D000022 ORTHO05D000071 5.2e-06 53.9 65 47.7
Atru.chr10.2127 Acer truncatum HOM05D000022 ORTHO05D000071 8.9e-06 53.1 65 47.7
Cc11_g00750 Coffea canephora HOM05D000022 ORTHO05D000071 8.9e-06 53.1 65 47.7
Cc11_g00770 Coffea canephora HOM05D000022 ORTHO05D000071 8.9e-06 53.1 65 47.7


User provided reference genes

Program Settings