Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g03440 Coffea canephora HOM05D004936 ORTHO05D005977 5.0e-80 301.2 171 100.0
SGA_v2.0_scaffold39G15257 Striga asiatica HOM05D004936 ORTHO05D005977 2.7e-65 252.3 171 83.6
QL01p039898 Quercus lobata HOM05D004936 ORTHO05D005977 1.0e-64 250.4 168 83.9
Hma1.2p1_0146F.1_g065480 Hydrangea macrophylla HOM05D004936 ORTHO05D005977 2.3e-64 249.2 167 75.4
Dinv28681 Davidia involucrata HOM05D004936 ORTHO05D005977 6.6e-64 247.7 168 83.3
Nitab4.5_0002493g0030 Nicotiana tabacum HOM05D004936 ORTHO05D005977 6.6e-64 247.7 169 84.6
Nitab4.5_0000158g0090 Nicotiana tabacum HOM05D004936 ORTHO05D005977 8.6e-64 247.3 169 84.6
Actinidia23210 Actinidia chinensis HOM05D004936 ORTHO05D005977 1.1e-63 246.9 153 89.5
Nitab4.5_0000570g0350 Nicotiana tabacum HOM05D004936 ORTHO05D005977 1.1e-63 246.9 169 84.0
HPP92_003695 Vanilla planifolia HOM05D004936 ORTHO05D005977 2.5e-63 245.7 164 87.2
MSTRG.4026 Avicennia marina HOM05D004936 ORTHO05D005977 5.6e-63 244.6 171 80.7
CiPaw.13G071600 Carya illinoinensis HOM05D004936 ORTHO05D005977 5.6e-63 244.6 168 78.6
Prupe.6G051100 Prunus persica HOM05D004936 ORTHO05D005977 1.6e-62 243.0 155 87.7
Potri.001G281200 Populus trichocarpa HOM05D004936 ORTHO05D005977 2.8e-62 242.3 158 76.6
Potri.009G076400 Populus trichocarpa HOM05D004936 ORTHO05D005977 2.8e-62 242.3 165 73.9
Ciclev10029395m.g Citrus clementina HOM05D004936 ORTHO05D005977 8.0e-62 240.7 172 71.5
Glyma.12G017200 Glycine max HOM05D004936 ORTHO05D005977 8.0e-62 240.7 169 79.9
Sed0012478 Sechium edule HOM05D004936 ORTHO05D005977 1.1e-61 240.4 172 80.8
TAR636G1077 Trochodendron aralioides HOM05D004936 ORTHO05D005977 1.1e-61 240.4 169 71.6
VMungo1127G0545 Vigna mungo HOM05D004936 ORTHO05D005977 1.1e-61 240.4 168 81.5
Phvul.011G019700 Phaseolus vulgaris HOM05D004936 ORTHO05D005977 1.4e-61 240.0 156 86.5
GSVIVG01024670001 Vitis vinifera HOM05D004936 ORTHO05D005977 1.8e-61 239.6 169 72.2
PGSC0003DMG402019636 Solanum tuberosum HOM05D004936 ORTHO05D005977 2.3e-61 239.2 156 84.0
Peaxi162Scf00624g00914 Petunia axillaris HOM05D004936 ORTHO05D005977 3.1e-61 238.8 166 79.5
Manes.03G100200 Manihot esculenta HOM05D004936 ORTHO05D005977 4.0e-61 238.4 170 73.5
CSS0031896 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 6.8e-61 237.7 172 72.7
CSS0046409 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 6.8e-61 237.7 172 72.7
Lalb_Chr03g0024401 Lupinus albus HOM05D004936 ORTHO05D005977 6.8e-61 237.7 164 81.7
SalBow5G1663 Salvia bowleyana HOM05D004936 ORTHO05D005977 6.8e-61 237.7 167 72.5
Migut.G00331 Erythranthe guttata HOM05D004936 ORTHO05D005977 1.2e-60 236.9 170 70.6
Glyma.09G223900 Glycine max HOM05D004936 ORTHO05D005977 1.2e-60 236.9 169 78.7
CANSAT54G2258 Cannabis sativa HOM05D004936 ORTHO05D005977 3.4e-60 235.3 168 76.2
CDE06G1927 Ceratophyllum demersum HOM05D004936 ORTHO05D005977 3.4e-60 235.3 169 72.8
Solyc11g068980.2 Solanum lycopersicum HOM05D004936 ORTHO05D005977 3.4e-60 235.3 169 79.3
Sopen11g027690 Solanum pennellii HOM05D004936 ORTHO05D005977 3.4e-60 235.3 169 79.3
CiPaw.14G055600 Carya illinoinensis HOM05D004936 ORTHO05D005977 7.5e-60 234.2 141 91.5
Manes.15G096000 Manihot esculenta HOM05D004936 ORTHO05D005977 1.3e-59 233.4 171 72.5
PGR044G1703 Punica granatum HOM05D004936 ORTHO05D005977 1.3e-59 233.4 170 78.2
Psat7g170640 Pisum sativum HOM05D004936 ORTHO05D005977 2.2e-59 232.6 169 76.9
Thecc.03G057900 Theobroma cacao HOM05D004936 ORTHO05D005977 2.2e-59 232.6 172 76.7
Duzib084G0838 Durio zibethinus HOM05D004936 ORTHO05D005977 2.9e-59 232.3 170 74.7
Lj2A1091T51 Lonicera japonica HOM05D004936 ORTHO05D005977 3.7e-59 231.9 175 76.6
RcHm_v2.0_Chr5g0071211 Rosa chinensis HOM05D004936 ORTHO05D005977 3.7e-59 231.9 164 70.7
Lj3g0015200 Lotus japonicus HOM05D004936 ORTHO05D005977 4.9e-59 231.5 163 81.0
THA.LOC104812175 Tarenaya hassleriana HOM05D004936 ORTHO05D005977 4.9e-59 231.5 159 71.1
DCAR_018221 Daucus carota HOM05D004936 ORTHO05D005977 6.4e-59 231.1 169 75.1
TPR.G39486 Trifolium pratense HOM05D004936 ORTHO05D005977 8.3e-59 230.7 169 77.5
Eucgr.K02762 Eucalyptus grandis HOM05D004936 ORTHO05D005977 1.4e-58 229.9 168 68.5
Medtr4g077950 Medicago truncatula HOM05D004936 ORTHO05D005977 1.9e-58 229.6 169 67.5
arahy.Tifrunner.gnm1.ann1.K3S5GW Arachis hypogaea HOM05D004936 ORTHO05D005977 4.1e-58 228.4 169 69.8
arahy.Tifrunner.gnm1.ann1.Z0D2FZ Arachis hypogaea HOM05D004936 ORTHO05D005977 4.1e-58 228.4 169 69.8
Rhsim13G0065400 Rhododendron simsii HOM05D004936 ORTHO05D005977 4.1e-58 228.4 164 70.7
Medtr2g070380 Medicago truncatula HOM05D004936 ORTHO05D005977 9.2e-58 227.3 169 66.9
Hund18959 Selenicereus undatus HOM05D004936 ORTHO05D005977 1.2e-57 226.9 147 74.8
HanXRQChr14g0439861 Helianthus annuus HOM05D004936 ORTHO05D005977 2.7e-57 225.7 169 67.5
A09p59990 Brassica napus HOM05D004936 ORTHO05D005977 6.0e-57 224.6 171 65.5
BraA09t41369Z Brassica rapa HOM05D004936 ORTHO05D005977 6.0e-57 224.6 171 65.5
Duzib068G0913 Durio zibethinus HOM05D004936 ORTHO05D005977 6.0e-57 224.6 176 68.2
MELO3C020507.2 Cucumis melo HOM05D004936 ORTHO05D005977 1.0e-56 223.8 171 74.9
AL1G30690 Arabidopsis lyrata HOM05D004936 ORTHO05D005977 1.3e-56 223.4 169 63.9
Thhalv10008922m.g Eutrema salsugineum HOM05D004936 ORTHO05D005977 1.3e-56 223.4 169 64.5
C08p43440 Brassica napus HOM05D004936 ORTHO05D005977 1.7e-56 223.0 171 64.9
BolC8t51892H Brassica oleracea HOM05D004936 ORTHO05D005977 1.7e-56 223.0 171 64.9
Aqoxy1G01790 Aquilegia oxysepala HOM05D004936 ORTHO05D005977 2.3e-56 222.6 168 67.9
BcaC07g41334 Brassica carinata HOM05D004936 ORTHO05D005977 2.3e-56 222.6 171 64.9
FAN16G3562 Fragaria x ananassa HOM05D004936 ORTHO05D005977 2.3e-56 222.6 164 65.2
BcaC07g38896 Brassica carinata HOM05D004936 ORTHO05D005977 3.0e-56 222.2 169 64.5
A08p30450 Brassica napus HOM05D004936 ORTHO05D005977 3.0e-56 222.2 168 66.1
C08p18520 Brassica napus HOM05D004936 ORTHO05D005977 3.0e-56 222.2 169 64.5
BolC8t49484H Brassica oleracea HOM05D004936 ORTHO05D005977 3.0e-56 222.2 169 64.5
Sp1g16280 Schrenkiella parvula HOM05D004936 ORTHO05D005977 3.9e-56 221.9 159 66.7
TWI75G1184 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 3.9e-56 221.9 166 75.9
TWI79G0082 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 3.9e-56 221.9 166 75.3
BcaB03g12974 Brassica carinata HOM05D004936 ORTHO05D005977 5.1e-56 221.5 171 63.7
BcaNung05441 Brassica carinata HOM05D004936 ORTHO05D005977 5.1e-56 221.5 171 63.7
FvH4_3g39470 Fragaria vesca HOM05D004936 ORTHO05D005977 5.1e-56 221.5 164 64.6
FAN11G2192 Fragaria x ananassa HOM05D004936 ORTHO05D005977 5.1e-56 221.5 164 64.6
FAN21G3073 Fragaria x ananassa HOM05D004936 ORTHO05D005977 5.1e-56 221.5 164 64.6
unitig_736.g22495 Utricularia gibba HOM05D004936 ORTHO05D005977 6.6e-56 221.1 171 64.9
BraA08t34977Z Brassica rapa HOM05D004936 ORTHO05D005977 8.6e-56 220.7 169 63.9
Atru.chr3.4141 Acer truncatum HOM05D004936 ORTHO05D005977 1.5e-55 219.9 174 65.5
PSO832G3733 Papaver somniferum HOM05D004936 ORTHO05D005977 1.9e-55 219.5 158 74.1
Aa31LG7G2800 Aethionema arabicum HOM05D004936 ORTHO05D005977 4.3e-55 218.4 169 65.1
PSO210G4578 Papaver somniferum HOM05D004936 ORTHO05D005977 4.3e-55 218.4 163 72.4
COL.COLO4_31393 Corchorus olitorius HOM05D004936 ORTHO05D005977 2.1e-54 216.1 174 63.2
vmacro02929 Vaccinium macrocarpon HOM05D004936 ORTHO05D005977 2.1e-54 216.1 211 55.0
Carub.0001s1794 Capsella rubella HOM05D004936 ORTHO05D005977 4.7e-54 214.9 170 61.8
CARHR018890 Cardamine hirsuta HOM05D004936 ORTHO05D005977 4.7e-54 214.9 170 62.4
EL10Ac7g15900 Beta vulgaris HOM05D004936 ORTHO05D005977 1.1e-53 213.8 167 64.7
Lsat_1_v5_gn_2_60241 Lactuca sativa HOM05D004936 ORTHO05D005977 1.1e-53 213.8 146 72.6
Gohir.A12G269500 Gossypium hirsutum HOM05D004936 ORTHO05D005977 2.3e-53 212.6 170 61.8
Os03g0296300 Oryza sativa ssp. japonica HOM05D004936 ORTHO05D005977 3.1e-53 212.2 164 65.2
AUR62009688 Chenopodium quinoa HOM05D004936 ORTHO05D005977 4.0e-53 211.8 169 63.9
Gorai.008G290300 Gossypium raimondii HOM05D004936 ORTHO05D005977 5.2e-53 211.5 169 62.7
Nn2g10980 Nelumbo nucifera HOM05D004936 ORTHO05D005977 5.2e-53 211.5 171 74.3
Gohir.D12G270000 Gossypium hirsutum HOM05D004936 ORTHO05D005977 6.8e-53 211.1 172 61.6
Ah.15g096180 Amaranthus hybridus HOM05D004936 ORTHO05D005977 4.4e-52 208.4 167 64.7
AUR62001892 Chenopodium quinoa HOM05D004936 ORTHO05D005977 7.6e-52 207.6 169 62.7
ECA238G2024 Erigeron canadensis HOM05D004936 ORTHO05D005977 2.9e-51 205.7 159 67.3
FAN25G3861 Fragaria x ananassa HOM05D004936 ORTHO05D005977 4.9e-51 204.9 141 68.8
Zm00001eb013690 Zea mays HOM05D004936 ORTHO05D005977 6.4e-51 204.5 169 59.8
Haze_24392 Corylus avellana HOM05D004936 ORTHO05D005977 1.4e-50 203.4 144 82.6
ClCG03G000300 Citrullus lanatus HOM05D000089 ORTHO05D000104 9.2e-50 200.7 151 77.5
CsaV3_1G036620 Cucumis sativus L. HOM05D004936 ORTHO05D005977 1.2e-49 200.3 171 60.2
Oeu011630.1 Olea europaea HOM05D004936 ORTHO05D005977 1.7e-48 196.4 142 82.4
Sc12g0000320 Simmondsia chinensis HOM05D004936 ORTHO05D005977 6.6e-48 194.5 102 92.2
Cfa011755 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.1e-47 193.7 141 80.9
MD03G1061000 Malus domestica HOM05D004936 ORTHO05D005977 1.5e-47 193.4 129 86.8
Nitab4.5_0003484g0120 Nicotiana tabacum HOM05D004936 ORTHO05D005977 1.6e-46 189.9 125 87.2
CAN.G3648.1 Capsicum annuum HOM05D004936 ORTHO05D005977 2.8e-46 189.1 142 78.9
CAN.G689.18 Capsicum annuum HOM05D004936 ORTHO05D005977 2.8e-46 189.1 142 78.9
Sabra16G0174900 Salix brachista HOM05D004936 ORTHO05D005977 1.4e-45 186.8 141 64.5
MD11G1063700 Malus domestica HOM05D004936 ORTHO05D005977 1.8e-45 186.4 135 70.4
Ca_18959_v3 Cicer arietinum L. HOM05D000232 ORTHO05D000145 8.9e-45 184.1 143 75.5
SMO353G0176 Selaginella moellendorffii HOM05D004936 ORTHO05D005977 2.0e-44 183.0 169 55.6
ATR0691G226 Amborella trichopoda HOM05D004936 ORTHO05D005977 9.9e-44 180.6 153 72.5
DCAR_027925 Daucus carota HOM05D004936 ORTHO05D005977 6.4e-43 177.9 143 69.2
Lj1A128T43 Lonicera japonica HOM05D004936 ORTHO05D005977 2.1e-41 172.9 136 75.0
Cpa.g.sc2.381 Carica papaya HOM05D004936 ORTHO05D005977 4.6e-41 171.8 142 65.5
SEGI_35825 Sequoiadendron giganteum HOM05D004936 ORTHO05D005977 3.0e-40 169.1 101 81.2
Mapoly0036s0081 Marchantia polymorpha HOM05D004936 ORTHO05D005977 6.6e-40 167.9 160 55.0
COL.COLO4_04994 Corchorus olitorius HOM05D000034 ORTHO05D000037 1.5e-39 166.8 144 61.1
Pp3c12_17590 Physcomitrium patens HOM05D004936 ORTHO05D005977 2.5e-39 166.0 144 57.6
AagrBONN_evm.TU.Sc2ySwM_344.4538 Anthoceros agrestis HOM05D004936 ORTHO05D005977 5.6e-39 164.9 161 60.2
Nn5g31489 Nelumbo nucifera HOM05D004936 ORTHO05D005977 4.0e-37 158.7 145 70.3
Nn6g34585 Nelumbo nucifera HOM05D004936 ORTHO05D005977 4.0e-37 158.7 145 70.3
Oeu023392.2 Olea europaea HOM05D004936 ORTHO05D005977 6.9e-37 157.9 143 60.1
Dinv09657 Davidia involucrata HOM05D004936 ORTHO05D005977 1.6e-33 146.7 79 87.3
Zm00001eb130910 Zea mays HOM05D004936 ORTHO05D005977 8.7e-32 141.0 98 68.4
Zm00001eb223780 Zea mays HOM05D004936 ORTHO05D005977 3.3e-31 139.0 98 67.3
Sed0020346 Sechium edule HOM05D004936 ORTHO05D005977 7.3e-31 137.9 162 59.9
CBR_g19040 Chara braunii HOM05D004936 ORTHO05D005977 9.0e-29 131.0 165 43.0
CANSAT21G2196 Cannabis sativa HOM05D004936 ORTHO05D005977 1.2e-28 130.6 75 81.3
TPR.G26511 Trifolium pratense HOM05D004936 ORTHO05D005977 5.8e-28 128.3 96 70.8
TAR633G2185 Trochodendron aralioides HOM05D004936 ORTHO05D005977 1.7e-27 126.7 112 73.2
AT3G10110 Arabidopsis thaliana HOM05D004936 ORTHO05D005977 1.1e-26 124.0 117 51.3
MD11G1064200 Malus domestica HOM05D004936 ORTHO05D005977 8.7e-24 114.4 64 85.9
Cre01.g021050 Chlamydomonas reinhardtii HOM05D004936 ORTHO05D005977 6.2e-22 108.2 153 39.9
PRCOL_00001564 Prasinoderma coloniale HOM05D004936 ORTHO05D005977 4.5e-20 102.1 159 38.4
Nitab4.5_0001270g0210 Nicotiana tabacum HOM05D004936 ORTHO05D005977 2.5e-18 96.3 76 65.8
MCO05G723 Micromonas commoda HOM05D004936 ORTHO05D005977 3.2e-18 95.9 145 37.9
Cfa023961 Carpinus fangiana HOM05D004936 ORTHO05D005977 1.9e-15 86.7 86 46.5
MD11G1064100 Malus domestica HOM05D004936 ORTHO05D005977 3.3e-15 85.9 72 61.1
Dinv09658 Davidia involucrata HOM05D004936 ORTHO05D005977 5.8e-12 75.1 73 72.6
TPR.G21432 Trifolium pratense HOM05D004936 ORTHO05D005977 2.5e-10 69.7 79 53.2
Nn6g32762 Nelumbo nucifera HOM05D004936 ORTHO05D005977 4.6e-09 65.5 50 66.0
TPR.G39290 Trifolium pratense HOM05D004936 ORTHO05D005977 1.8e-08 63.5 39 76.9
MD05G1160000 Malus domestica HOM05D004936 ORTHO05D005977 2.3e-08 63.2 40 77.5
Cpa.g.sc2.380 Carica papaya HOM05D004936 ORTHO05D005977 1.5e-07 60.5 33 87.9
arahy.Tifrunner.gnm1.ann1.BM2UDG Arachis hypogaea HOM05D004936 ORTHO05D086586 4.3e-07 58.9 27 96.3
arahy.Tifrunner.gnm1.ann1.6CLX5T Arachis hypogaea HOM05D005939 ORTHO05D026929 1.3e-06 57.4 27 92.6
arahy.Tifrunner.gnm1.ann1.AL6ICI Arachis hypogaea HOM05D005939 ORTHO05D007412 1.3e-06 57.4 27 92.6
DCAR_027921 Daucus carota HOM05D004936 ORTHO05D005977 2.2e-06 56.6 34 67.6
Rhsim06G0225900 Rhododendron simsii HOM05D004024 ORTHO05D004639 4.8e-06 55.5 69 44.9
CBR_g19503 Chara braunii HOM05D004024 ORTHO05D004639 8.2e-06 54.7 84 40.5
vmacro11567 Vaccinium macrocarpon HOM05D004024 ORTHO05D004639 8.2e-06 54.7 69 43.5


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