Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 8.5e-219 763.5 407 100.0
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 4.0e-144 515.4 410 66.3
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 2.1e-137 493.0 400 65.5
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 4.9e-134 481.9 404 62.6
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 2.5e-133 479.6 404 62.4
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 7.1e-133 478.0 397 63.7
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.5e-130 470.3 404 62.9
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 7.4e-130 468.0 388 64.2
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 4.0e-128 462.2 406 61.8
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 9.0e-128 461.1 370 64.9
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 5.8e-127 458.4 374 61.8
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 7.6e-127 458.0 394 60.9
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 1.3e-126 457.2 362 64.1
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 9.3e-125 451.1 388 60.8
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 6.0e-124 448.4 399 59.4
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 7.9e-124 448.0 394 60.9
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 1.0e-123 447.6 388 60.6
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 1.8e-123 446.8 397 59.9
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 3.9e-123 445.7 408 59.3
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 2.5e-122 443.0 392 61.5
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 4.3e-122 442.2 374 60.4
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 7.4e-122 441.4 381 59.8
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 1.8e-120 436.8 392 60.7
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 3.1e-120 436.0 450 54.7
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 4.1e-120 435.6 450 54.9
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 3.4e-119 432.6 478 51.9
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 1.7e-118 430.3 407 55.3
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 2.9e-118 429.5 355 62.5
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 4.2e-117 425.6 414 56.5
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 7.2e-117 424.9 385 60.3
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 4.6e-116 422.2 404 56.4
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 7.9e-116 421.4 368 57.1
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.0e-115 421.0 394 57.1
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 3.0e-115 419.5 369 59.1
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 3.9e-115 419.1 405 57.0
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 8.8e-115 417.9 366 57.4
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 2.0e-114 416.8 396 55.1
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.7e-113 413.7 357 59.1
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 1.7e-113 413.7 397 55.4
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 2.8e-113 412.9 368 56.0
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 6.3e-113 411.8 408 53.9
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 6.3e-113 411.8 368 58.2
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 1.8e-112 410.2 376 57.7
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 3.1e-112 409.5 408 54.4
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 6.9e-112 408.3 377 58.9
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 6.9e-112 408.3 360 57.8
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 9.1e-112 407.9 409 55.0
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 1.2e-111 407.5 390 55.9
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 1.5e-111 407.1 377 55.7
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 2.0e-111 406.8 357 58.3
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 2.6e-111 406.4 409 54.8
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 4.5e-111 405.6 376 57.2
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 1.0e-110 404.4 377 57.8
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 3.8e-110 402.5 377 57.0
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 2.5e-109 399.8 377 56.8
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 2.5e-109 399.8 391 54.0
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 3.2e-109 399.4 377 57.0
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 7.2e-109 398.3 436 49.5
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 9.4e-109 397.9 368 57.6
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 4.7e-108 395.6 369 56.9
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 1.8e-107 393.7 390 54.6
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 6.7e-107 391.7 366 56.0
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 6.7e-107 391.7 390 54.4
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 2.6e-106 389.8 373 55.0
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 9.7e-106 387.9 367 56.1
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 4.5e-103 379.0 329 57.8
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 8.5e-102 374.8 310 61.6
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 1.3e-97 360.9 364 53.0
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 2.3e-91 340.1 407 48.4
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 8.8e-91 338.2 409 49.1
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 4.7e-84 315.8 411 48.4
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 2.2e-81 307.0 278 59.4
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 1.1e-80 304.7 369 49.6
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 7.7e-79 298.5 275 57.8
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.1e-77 294.7 276 57.6
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 1.6e-76 290.8 250 58.4
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 3.0e-75 286.6 373 42.9
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 4.0e-75 286.2 295 52.5
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 1.4e-67 261.2 362 42.8
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 1.8e-67 260.8 237 58.6
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.1e-64 251.5 255 53.7
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 1.7e-62 244.2 389 40.1
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 1.9e-53 214.2 167 63.5
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 1.4e-51 208.0 397 32.7
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 2.6e-50 203.8 357 38.7
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 5.6e-45 186.0 212 48.6
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 8.1e-44 182.2 162 59.3
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 1.8e-43 181.0 309 35.3
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 4.6e-39 166.4 296 33.4
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 4.4e-34 149.8 203 46.3
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 2.1e-31 141.0 293 31.4
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 4.5e-26 123.2 108 56.5
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 1.8e-22 111.3 92 58.7
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 1.5e-21 108.2 71 77.5
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 4.2e-16 90.1 94 50.0
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 9.6e-13 79.0 67 55.2
BcaB06g26853 Brassica carinata HOM05D007498 ORTHO05D009384 4.2e-08 63.5 119 34.5
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 2.7e-07 60.8 336 24.7
Hma1.2p1_0227F.1_g096410 Hydrangea macrophylla HOM05D004595 ORTHO05D005800 1.3e-06 58.5 39 74.4


User provided reference genes

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