Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g02570 Coffea canephora HOM05D003487 ORTHO05D000140 4.2e-74 281.2 133 100.0
Cc11_g14620 Coffea canephora HOM05D003487 ORTHO05D000140 7.2e-18 94.4 79 62.0
Nitab4.5_0000184g0260 Nicotiana tabacum HOM05D003487 ORTHO05D000140 2.0e-07 59.7 47 59.6
Sopen06g011790 Solanum pennellii HOM05D003487 ORTHO05D000140 2.6e-07 59.3 47 57.4
Nitab4.5_0003364g0100 Nicotiana tabacum HOM05D003487 ORTHO05D000140 4.4e-07 58.5 47 59.6
Hund03759 Selenicereus undatus HOM05D003487 ORTHO05D000140 5.8e-07 58.2 50 48.0
Solyc10g018645.1 Solanum lycopersicum HOM05D003487 ORTHO05D000140 7.5e-07 57.8 47 55.3
Sopen09g020440 Solanum pennellii HOM05D003487 ORTHO05D000140 7.5e-07 57.8 46 58.7
QL08p053984 Quercus lobata HOM05D000034 ORTHO05D000037 1.3e-06 57.0 77 37.7
vmacro02377 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 1.3e-06 57.0 45 57.8
Hma1.2p1_0619F.1_g190440 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 1.7e-06 56.6 51 51.0
Nitab4.5_0002082g0050 Nicotiana tabacum HOM05D003487 ORTHO05D000140 1.7e-06 56.6 47 57.4
Solyc12g036870.3 Solanum lycopersicum HOM05D003487 ORTHO05D000140 1.7e-06 56.6 57 45.6
CAN.G1245.13 Capsicum annuum HOM05D003487 ORTHO05D000140 2.2e-06 56.2 47 53.2
Hund12564 Selenicereus undatus HOM05D003487 ORTHO05D000140 2.2e-06 56.2 47 51.1
Hund12608 Selenicereus undatus HOM05D003487 ORTHO05D000140 2.2e-06 56.2 47 51.1
Hund21113 Selenicereus undatus HOM05D003487 ORTHO05D000140 2.2e-06 56.2 47 51.1
Hund31241 Selenicereus undatus HOM05D003487 ORTHO05D000140 2.9e-06 55.8 47 51.1
vmacro11918 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 2.9e-06 55.8 45 57.8
QL09p003516 Quercus lobata HOM05D000005 ORTHO05D000012 3.7e-06 55.5 70 38.6
CAN.G401.11 Capsicum annuum HOM05D003487 ORTHO05D000140 4.9e-06 55.1 47 53.2
Hma1.2p1_0825F.1_g224780 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 4.9e-06 55.1 51 47.1
Potri.011G088750 Populus trichocarpa HOM05D003487 ORTHO05D000140 4.9e-06 55.1 71 36.6
QL09p003532 Quercus lobata HOM05D000005 ORTHO05D000012 4.9e-06 55.1 99 33.3
vmacro08490 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 4.9e-06 55.1 45 55.6
CAN.G1245.14 Capsicum annuum HOM05D003487 ORTHO05D000140 6.4e-06 54.7 47 55.3
Rhsim06G0037500 Rhododendron simsii HOM05D000122 ORTHO05D000139 6.4e-06 54.7 47 55.3
Hund18021 Selenicereus undatus HOM05D003487 ORTHO05D000140 6.4e-06 54.7 47 48.9
Hma1.2p1_0148F.1_g065930 Hydrangea macrophylla HOM05D000034 ORTHO05D000140 8.3e-06 54.3 51 47.1
Hund31263 Selenicereus undatus HOM05D003487 ORTHO05D000140 8.3e-06 54.3 47 46.8


User provided reference genes

Program Settings