Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 0.0e+00 2333.1 1213 100.0
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 5.3e-176 622.9 1371 36.8
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 1.0e-166 592.0 1353 36.3
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 8.5e-166 589.0 1380 36.3
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 3.0e-163 580.5 1481 35.2
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 1.3e-158 565.1 1399 34.9
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 8.6e-158 562.4 1395 34.6
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 8.6e-142 509.2 1390 34.7
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 1.5e-141 508.4 1338 34.2
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 1.2e-140 505.4 1367 33.7
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 9.2e-136 489.2 1361 35.0
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.0e-134 485.7 1273 35.2
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 3.9e-134 483.8 1432 33.2
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.1e-133 482.3 1273 35.0
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.0e-126 459.1 1395 32.5
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 1.3e-126 458.8 1375 33.2
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 3.9e-126 457.2 1452 31.7
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 3.4e-122 444.1 1163 33.7
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 7.6e-122 443.0 1309 31.2
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 9.9e-122 442.6 1420 32.3
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 8.4e-121 439.5 1446 31.2
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 3.5e-119 434.1 1404 31.9
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 6.2e-116 423.3 1436 30.8
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 7.6e-114 416.4 1346 32.0
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 9.9e-114 416.0 919 36.0
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 7.1e-112 409.8 1403 29.9
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 2.1e-111 408.3 1406 29.9
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 7.4e-109 399.8 1408 31.4
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 1.4e-107 395.6 1114 31.7
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 2.4e-107 394.8 1359 29.6
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 1.5e-106 392.1 1452 29.6
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 3.8e-105 387.5 1394 30.2
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 6.7e-102 376.7 1257 30.3
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 2.1e-100 371.7 1302 29.7
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 8.1e-100 369.8 1416 30.4
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.8e-99 368.6 1408 30.2
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 9.0e-99 366.3 1360 30.4
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 2.0e-98 365.2 1333 30.6
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 2.6e-98 364.8 1336 30.5
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 1.7e-97 362.1 1403 30.1
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 8.7e-94 349.7 1290 29.2
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.3e-93 347.8 1288 30.4
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.3e-93 347.8 1288 30.4
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 2.1e-92 345.1 1430 28.3
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 4.8e-92 344.0 1365 28.2
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 9.0e-91 339.7 1415 28.4
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 3.4e-90 337.8 1358 29.1
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 4.5e-90 337.4 1366 29.5
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 4.5e-90 337.4 1370 29.2
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.3e-89 335.9 1370 29.5
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 8.5e-89 333.2 1355 29.5
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 1.4e-88 332.4 1456 27.7
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 2.5e-88 331.6 1380 27.4
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 3.2e-88 331.3 1431 28.4
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 9.7e-85 319.7 1375 28.2
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 1.4e-83 315.8 1371 28.1
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 4.1e-83 314.3 1268 28.6
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 9.1e-83 313.2 1344 29.0
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 1.3e-81 309.3 1551 27.1
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 1.7e-81 308.9 1276 29.0
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 4.2e-80 304.3 1367 28.7
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 7.2e-80 303.5 1176 30.8
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 2.7e-79 301.6 1278 28.7
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 4.6e-79 300.8 1233 29.7
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 1.3e-76 292.7 1268 28.5
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 4.8e-76 290.8 1262 28.8
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 2.4e-75 288.5 1294 28.1
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 1.5e-74 285.8 1267 28.3
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 2.0e-74 285.4 1260 28.3
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 2.6e-74 285.0 1265 28.0
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 2.6e-74 285.0 1265 28.0
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 4.5e-74 284.3 1270 28.0
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 1.3e-73 282.7 1312 28.0
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 3.8e-73 281.2 1416 27.3
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 7.2e-72 276.9 1339 27.1
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.4e-70 272.7 1245 27.8
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 2.3e-70 271.9 1267 27.6
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 8.8e-70 270.0 1281 25.9
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 1.1e-69 269.6 1286 27.2
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 1.1e-69 269.6 1251 28.2
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 2.6e-69 268.5 1190 27.0
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 5.0e-65 254.2 911 27.7
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 2.7e-63 248.4 1567 24.8
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.4e-62 246.1 451 35.0
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 6.7e-62 243.8 1289 25.8
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 4.4e-61 241.1 1324 26.0
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 5.3e-59 234.2 1230 27.4
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 1.6e-55 222.6 1344 26.2
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 2.1e-55 222.2 509 32.2
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 1.0e-54 219.9 341 41.1
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 1.3e-52 213.0 1350 25.3
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 1.7e-52 212.6 454 35.2
Gohir.A11G147500 Gossypium hirsutum HOM05D005171 ORTHO05D006343 2.7e-50 205.3 1118 27.2
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.0e-49 203.4 567 27.9
ECA240G4228 Erigeron canadensis HOM05D005171 ORTHO05D006343 1.3e-49 203.0 526 33.5
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 5.0e-49 201.1 604 34.6
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 2.5e-48 198.7 419 35.3
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 9.5e-48 196.8 1269 25.2
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 3.6e-47 194.9 507 31.8
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 2.3e-46 192.2 423 35.2
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 1.8e-43 182.6 1265 24.5
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 3.1e-43 181.8 1328 23.4
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 3.5e-42 178.3 419 33.4
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 1.3e-41 176.4 1259 23.5
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 4.3e-40 171.4 1481 22.8
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 9.5e-40 170.2 436 31.0
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 3.6e-39 168.3 155 56.8
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 8.0e-39 167.2 208 45.2
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 3.2e-35 155.2 280 38.6
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 4.1e-35 154.8 291 42.3
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 3.0e-33 148.7 282 42.2
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 2.5e-32 145.6 125 59.2
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 1.8e-30 139.4 302 32.8
Gohir.A08G049000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 8.9e-30 137.1 789 25.6
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 5.8e-29 134.4 314 38.5
PSO675G6191 Papaver somniferum HOM05D005171 ORTHO05D006343 3.1e-22 112.1 126 50.0
Actinidia12355 Actinidia chinensis HOM05D005171 ORTHO05D006343 2.9e-20 105.5 439 29.6
Glyma.20G061000 Glycine max HOM05D005171 ORTHO05D006343 6.6e-17 94.4 280 35.0
Os06g0608100 Oryza sativa ssp. japonica HOM05D005171 ORTHO05D006343 4.3e-16 91.7 431 29.5
PSO478G0307 Papaver somniferum HOM05D005171 ORTHO05D006343 8.1e-15 87.4 350 28.6
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 2.4e-14 85.9 152 46.1
SEGI_15711 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 4.0e-14 85.1 118 36.4
Duzib211G0583 Durio zibethinus HOM05D005171 ORTHO05D006343 1.2e-13 83.6 91 45.1
SalBow7G0566 Salvia bowleyana HOM05D005171 ORTHO05D006343 5.8e-13 81.3 135 44.4
TPR.G30970 Trifolium pratense HOM05D005171 ORTHO05D006343 1.4e-11 76.6 154 34.4
ECA240G0272 Erigeron canadensis HOM05D004103 ORTHO05D005242 2.4e-11 75.9 97 51.5
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 4.1e-11 75.1 84 45.2
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 1.3e-09 70.1 76 47.4
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 6.6e-09 67.8 63 52.4
Gohir.A11G147450 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.1e-06 60.5 125 40.0
Cpa.g.sc136.58 Carica papaya HOM05D005171 ORTHO05D006343 5.2e-06 58.2 123 42.3
CDE02G4591 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 5.2e-06 58.2 136 37.5


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