Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g01670 Coffea canephora HOM05D007556 ORTHO05D002252 2.3e-50 202.6 125 100.0
Cc02_g17690 Coffea canephora HOM05D007556 ORTHO05D002252 5.8e-25 118.2 109 67.9
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 9.2e-15 84.3 103 50.5
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.9e-12 76.6 98 44.9
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 7.3e-12 74.7 104 44.2
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 2.1e-11 73.2 101 43.6
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 1.8e-10 70.1 107 44.9
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.4e-10 69.7 102 45.1
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.1e-10 69.3 98 45.9
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 4.0e-10 68.9 99 45.5
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 4.0e-10 68.9 103 43.7
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 9.0e-10 67.8 98 44.9
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.2e-09 67.4 123 41.5
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.2e-09 67.4 106 45.3
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 2.0e-09 66.6 102 45.1
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.0e-09 66.6 98 45.9
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.6e-09 66.2 98 43.9
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 2.6e-09 66.2 107 41.1
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 2.6e-09 66.2 103 42.7
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.6e-09 66.2 102 43.1
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 2.6e-09 66.2 106 43.4
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 3.4e-09 65.9 101 42.6
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 3.4e-09 65.9 95 46.3
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 7.6e-09 64.7 102 43.1
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 7.6e-09 64.7 109 40.4
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.9e-09 64.3 102 44.1
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 9.9e-09 64.3 98 37.8
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 1.3e-08 63.9 103 44.7
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.3e-08 63.9 103 42.7
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.3e-08 63.9 98 37.8
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.7e-08 63.5 97 40.2
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.7e-08 63.5 105 41.0
PGR042G3705 Punica granatum HOM05D007556 ORTHO05D002252 2.2e-08 63.2 103 41.7
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.9e-08 62.8 98 36.7
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 4.9e-08 62.0 98 37.8
PGR042G1382 Punica granatum HOM05D007556 ORTHO05D002252 6.4e-08 61.6 103 40.8
Migut.N01232 Erythranthe guttata HOM05D007556 ORTHO05D002252 8.4e-08 61.2 102 39.2
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.1e-07 60.8 127 37.8
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.4e-07 60.5 103 41.7
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.9e-07 60.1 117 41.9
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 2.4e-07 59.7 106 38.7
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.2e-07 58.9 102 42.2
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 4.2e-07 58.9 101 41.6
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 5.4e-07 58.5 105 43.8
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 9.3e-07 57.8 110 36.4
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 9.3e-07 57.8 97 41.2
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.2e-06 57.4 101 45.5
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-06 57.4 87 43.7
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 6.0e-06 55.1 81 45.7
COL.COLO4_25910 Corchorus olitorius HOM05D007556 ORTHO05D002252 7.8e-06 54.7 127 33.1


User provided reference genes

Program Settings