Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g01500 Coffea canephora HOM05D000021 ORTHO05D044655 1.6e-81 307.4 395 100.0
Cc02_g15280 Coffea canephora HOM05D000021 ORTHO05D000010 1.5e-15 88.2 327 55.4
Cc02_g15310 Coffea canephora HOM05D000021 ORTHO05D000010 2.6e-15 87.4 334 56.6
Cc00_g26530 Coffea canephora HOM05D000021 ORTHO05D000010 1.7e-14 84.7 131 70.2
Cc02_g15300 Coffea canephora HOM05D000021 ORTHO05D000010 2.9e-14 84.0 131 67.9
Cc00_g24410 Coffea canephora HOM05D000021 ORTHO05D000010 5.0e-14 83.2 133 66.2
Cc02_g15290 Coffea canephora HOM05D000021 ORTHO05D000010 8.5e-14 82.4 80 55.0
Cc02_g15380 Coffea canephora HOM05D000021 ORTHO05D044655 1.2e-12 78.6 45 86.7
Solyc03g006100.4 Solanum lycopersicum HOM05D000021 ORTHO05D000010 4.8e-09 66.6 66 51.5
Cc00_g30640 Coffea canephora HOM05D000021 ORTHO05D000010 1.4e-08 65.1 66 59.1
Duzib151G0099 Durio zibethinus HOM05D000021 ORTHO05D000010 4.1e-08 63.5 64 48.4
CAN.G1286.25 Capsicum annuum HOM05D000021 ORTHO05D000010 6.9e-08 62.8 65 49.2
COL.COLO4_27016 Corchorus olitorius HOM05D000021 ORTHO05D000010 6.9e-08 62.8 65 44.6
Cc00_g29550 Coffea canephora HOM05D000021 ORTHO05D000010 9.1e-08 62.4 32 87.5
Cc08_g10170 Coffea canephora HOM05D000021 ORTHO05D000010 9.1e-08 62.4 66 50.0
Cc08_g10280 Coffea canephora HOM05D000021 ORTHO05D000010 1.2e-07 62.0 79 44.3
RcHm_v2.0_Chr2g0113771 Rosa chinensis HOM05D000021 ORTHO05D000010 1.5e-07 61.6 64 39.1
MD07G1035900 Malus domestica HOM05D000021 ORTHO05D000010 2.0e-07 61.2 64 45.3
Cc03_g09240 Coffea canephora HOM05D000021 ORTHO05D000010 2.6e-07 60.8 76 48.7
Cc08_g10210 Coffea canephora HOM05D000021 ORTHO05D000010 2.6e-07 60.8 85 42.4
Duzib106G0488 Durio zibethinus HOM05D000021 ORTHO05D000010 2.6e-07 60.8 78 43.6
Oeu056112.2 Olea europaea HOM05D000021 ORTHO05D000010 2.6e-07 60.8 66 51.5
vmacro09400 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.6e-07 60.8 65 49.2
SalBow4G3259 Salvia bowleyana HOM05D000021 ORTHO05D000010 3.4e-07 60.5 78 48.7
Cc08_g10270 Coffea canephora HOM05D000021 ORTHO05D000010 4.5e-07 60.1 79 45.6
MD07G1034900 Malus domestica HOM05D000021 ORTHO05D000010 4.5e-07 60.1 64 42.2
Cc09_g06870 Coffea canephora HOM05D000021 ORTHO05D000010 7.7e-07 59.3 64 45.3
Migut.I00376 Erythranthe guttata HOM05D000021 ORTHO05D000010 7.7e-07 59.3 78 47.4
SalBow1G8747 Salvia bowleyana HOM05D000021 ORTHO05D000010 7.7e-07 59.3 49 63.3
Cc02_g15450 Coffea canephora HOM05D000021 ORTHO05D000010 1.0e-06 58.9 34 73.5
PGSC0003DMG400023614 Solanum tuberosum HOM05D000021 ORTHO05D000010 1.7e-06 58.2 62 46.8
Ciclev10030555m.g Citrus clementina HOM05D000021 ORTHO05D000010 2.2e-06 57.8 80 43.8
Cc00_g21480 Coffea canephora HOM05D000021 ORTHO05D000010 2.2e-06 57.8 36 69.4
DCAR_014787 Daucus carota HOM05D000021 ORTHO05D000010 2.2e-06 57.8 74 47.3
RcHm_v2.0_Chr5g0040131 Rosa chinensis HOM05D000021 ORTHO05D000010 2.2e-06 57.8 58 46.6
Duzib213G0537 Durio zibethinus HOM05D000053 ORTHO05D000035 2.9e-06 57.4 63 52.4
Duzib213G0562 Durio zibethinus HOM05D000021 ORTHO05D000010 2.9e-06 57.4 48 58.3
ECA238G2109 Erigeron canadensis HOM05D000021 ORTHO05D000010 2.9e-06 57.4 55 50.9
Migut.G01081 Erythranthe guttata HOM05D000021 ORTHO05D000010 2.9e-06 57.4 47 61.7
Haze_19487 Corylus avellana HOM05D000021 ORTHO05D000127 3.8e-06 57.0 81 35.8
Gohir.D05G343000 Gossypium hirsutum HOM05D000021 ORTHO05D000010 3.8e-06 57.0 66 47.0
MD05G1298300 Malus domestica HOM05D000021 ORTHO05D000010 3.8e-06 57.0 66 43.9
SalBow1G1767 Salvia bowleyana HOM05D000021 ORTHO05D000010 3.8e-06 57.0 69 44.9
SalBow7G2762 Salvia bowleyana HOM05D000021 ORTHO05D000010 3.8e-06 57.0 102 40.2
Duzib213G1008 Durio zibethinus HOM05D000021 ORTHO05D000010 5.0e-06 56.6 48 60.4
Hma1.2p1_0614F.1_g189570 Hydrangea macrophylla HOM05D000021 ORTHO05D000010 5.0e-06 56.6 129 29.5
Nitab4.5_0005171g0080 Nicotiana tabacum HOM05D000021 ORTHO05D000010 5.0e-06 56.6 79 43.0
RcHm_v2.0_Chr2g0113671 Rosa chinensis HOM05D000021 ORTHO05D000010 5.0e-06 56.6 64 39.1
SalBow1G0026 Salvia bowleyana HOM05D000021 ORTHO05D000010 5.0e-06 56.6 74 47.3
Sopen04g007010 Solanum pennellii HOM05D000021 ORTHO05D000010 5.0e-06 56.6 67 43.3
Cc09_g05620 Coffea canephora HOM05D000021 ORTHO05D000010 6.5e-06 56.2 81 44.4
Migut.H01443 Erythranthe guttata HOM05D000021 ORTHO05D000010 6.5e-06 56.2 109 34.9
SalBow1G3462 Salvia bowleyana HOM05D000021 ORTHO05D000010 6.5e-06 56.2 78 48.7
SalBow4G2193 Salvia bowleyana HOM05D000021 ORTHO05D000010 6.5e-06 56.2 49 63.3
Migut.G00800 Erythranthe guttata HOM05D000021 ORTHO05D000010 8.5e-06 55.8 48 56.2
Peaxi162Scf00045g00637 Petunia axillaris HOM05D000021 ORTHO05D000010 8.5e-06 55.8 48 52.1
SalBow4G0629 Salvia bowleyana HOM05D000021 ORTHO05D000010 8.5e-06 55.8 48 60.4
SalBow4G2294 Salvia bowleyana HOM05D000021 ORTHO05D000010 8.5e-06 55.8 78 46.2


User provided reference genes

Program Settings