Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g01100 Coffea canephora HOM05D022062 ORTHO05D025123 5.4e-56 220.7 108 100.0
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 3.3e-21 105.1 104 51.9
Cc04_g14710 Coffea canephora HOM05D017605 ORTHO05D025123 7.2e-16 87.4 89 47.2
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 1.8e-11 72.8 61 55.7
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-11 72.4 96 38.5
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-11 72.0 96 38.5
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-08 63.5 108 34.3
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 1.5e-08 63.2 105 29.5
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-08 62.8 108 33.3
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 3.2e-08 62.0 78 37.2
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 3.2e-08 62.0 78 39.7
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 3.2e-08 62.0 78 34.6
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-08 62.0 96 31.2
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 5.5e-08 61.2 84 35.7
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 7.2e-08 60.8 105 31.4
Cc09_g07530 Coffea canephora HOM05D006612 ORTHO05D009014 7.2e-08 60.8 78 41.0
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 7.2e-08 60.8 96 29.2
CANSAT78G1911 Cannabis sativa HOM05D000096 ORTHO05D010619 9.4e-08 60.5 78 37.2
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 1.6e-07 59.7 78 34.6
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.6e-07 59.7 60 38.3
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-07 59.7 78 39.7
Haze_01485 Corylus avellana HOM05D006612 ORTHO05D010384 2.7e-07 58.9 88 34.1
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 3.6e-07 58.5 70 35.7
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 4.7e-07 58.2 78 34.6
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-07 58.2 78 34.6
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 6.1e-07 57.8 78 32.1
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 6.1e-07 57.8 78 35.9
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 6.1e-07 57.8 78 33.3
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 6.1e-07 57.8 78 33.3
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 6.1e-07 57.8 78 33.3
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 8.0e-07 57.4 73 37.0
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 8.0e-07 57.4 73 37.0
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 8.0e-07 57.4 73 37.0
Haze_21982 Corylus avellana HOM05D009267 ORTHO05D010384 8.0e-07 57.4 96 32.3
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 1.0e-06 57.0 105 30.5
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.4e-06 56.6 73 34.2
Cc00_g13000 Coffea canephora HOM05D006612 ORTHO05D009014 1.4e-06 56.6 82 32.9
Oeu030932.1 Olea europaea HOM05D019936 ORTHO05D010619 1.4e-06 56.6 80 33.8
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.8e-06 56.2 73 37.0
Oeu058483.1 Olea europaea HOM05D008860 ORTHO05D010619 2.3e-06 55.8 104 31.7
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 3.0e-06 55.5 78 34.6
Aqoxy3G03684 Aquilegia oxysepala HOM05D000824 ORTHO05D003555 4.0e-06 55.1 61 37.7
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-06 55.1 78 33.3
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 5.2e-06 54.7 73 35.6
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 5.2e-06 54.7 77 28.6
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 5.2e-06 54.7 77 28.6
Rhsim04G0143100 Rhododendron simsii HOM05D022062 ORTHO05D025123 5.2e-06 54.7 70 37.1
Rhsim04G0143800 Rhododendron simsii HOM05D022062 ORTHO05D025123 5.2e-06 54.7 70 37.1
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 8.8e-06 53.9 65 36.9
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.8e-06 53.9 65 32.3
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.8e-06 53.9 91 28.6


User provided reference genes

Program Settings