Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g00900 Coffea canephora HOM05D004281 ORTHO05D004839 3.2e-26 120.9 59 100.0
Cc00_g25460 Coffea canephora HOM05D004281 ORTHO05D004839 4.2e-18 94.0 46 97.8
Cc00_g15810 Coffea canephora HOM05D004281 ORTHO05D004839 1.0e-16 89.4 58 81.0
Cc00_g12430 Coffea canephora HOM05D004281 ORTHO05D004839 1.1e-15 85.9 46 89.1
Cc00_g16880 Coffea canephora HOM05D004281 ORTHO05D004839 1.5e-15 85.5 42 95.2
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 3.3e-15 84.3 42 92.9
COL.COLO4_27572 Corchorus olitorius HOM05D004281 ORTHO05D004839 3.3e-15 84.3 42 92.9
Haze_11113 Corylus avellana HOM05D004281 ORTHO05D004839 3.3e-15 84.3 42 92.9
Eucgr.F02801 Eucalyptus grandis HOM05D004281 ORTHO05D004839 3.3e-15 84.3 42 92.9
Oeu014981.1 Olea europaea HOM05D004281 ORTHO05D004839 3.3e-15 84.3 42 92.9
SGA_v2.0_scaffold37G14906 Striga asiatica HOM05D004281 ORTHO05D004839 3.3e-15 84.3 42 92.9
GSVIVG01038261001 Vitis vinifera HOM05D004281 ORTHO05D004839 3.3e-15 84.3 42 92.9
Eucgr.L01202 Eucalyptus grandis HOM05D004281 ORTHO05D004839 4.3e-15 84.0 42 90.5
Manes.02G102600 Manihot esculenta HOM05D004281 ORTHO05D004839 4.3e-15 84.0 42 92.9
Thecc.05G001000 Theobroma cacao HOM05D004281 ORTHO05D004839 4.3e-15 84.0 42 92.9
Actinidia18388 Actinidia chinensis HOM05D004281 ORTHO05D004839 7.4e-15 83.2 42 90.5
Cc00_g34060 Coffea canephora HOM05D004281 ORTHO05D004839 7.4e-15 83.2 54 79.6
Cc05_g03580 Coffea canephora HOM05D004281 ORTHO05D004839 7.4e-15 83.2 42 92.9
Nn1g09410 Nelumbo nucifera HOM05D004281 ORTHO05D004839 7.4e-15 83.2 42 90.5
TAR365G0664 Trochodendron aralioides HOM05D004281 ORTHO05D004839 7.4e-15 83.2 42 90.5
CSS0013668 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 9.7e-15 82.8 42 90.5
CSS0036502 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 9.7e-15 82.8 42 90.5
CANSAT78G2301 Cannabis sativa HOM05D004281 ORTHO05D004839 9.7e-15 82.8 42 88.1
Dinv24743 Davidia involucrata HOM05D004281 ORTHO05D004839 1.3e-14 82.4 42 90.5
Potri.017G001800 Populus trichocarpa HOM05D004281 ORTHO05D004839 1.3e-14 82.4 42 88.1
Ah.13g073140 Amaranthus hybridus HOM05D000705 ORTHO05D004839 2.2e-14 81.6 42 88.1
CiPaw.01G202700 Carya illinoinensis HOM05D004281 ORTHO05D004839 2.2e-14 81.6 42 90.5
Medtr4g094700 Medicago truncatula HOM05D004281 ORTHO05D004839 2.2e-14 81.6 42 88.1
Psat7g088840 Pisum sativum HOM05D004281 ORTHO05D004839 2.2e-14 81.6 42 88.1
PGR142G2669 Punica granatum HOM05D004281 ORTHO05D004839 2.2e-14 81.6 42 90.5
arahy.Tifrunner.gnm1.ann1.MYV34H Arachis hypogaea HOM05D004281 ORTHO05D004839 2.8e-14 81.3 42 85.7
MSTRG.24546 Avicennia marina HOM05D004281 ORTHO05D004839 2.8e-14 81.3 42 85.7
AUR62002492 Chenopodium quinoa HOM05D004281 ORTHO05D004839 2.8e-14 81.3 42 85.7
AUR62023693 Chenopodium quinoa HOM05D004281 ORTHO05D004839 2.8e-14 81.3 42 85.7
Cc00_g08810 Coffea canephora HOM05D004281 ORTHO05D004839 2.8e-14 81.3 42 92.9
ECA233G0955 Erigeron canadensis HOM05D004281 ORTHO05D004839 2.8e-14 81.3 42 85.7
Lsat_1_v5_gn_8_33340 Lactuca sativa HOM05D004281 ORTHO05D004839 2.8e-14 81.3 42 85.7
Lj4A426G8 Lonicera japonica HOM05D004281 ORTHO05D004839 2.8e-14 81.3 42 85.7
Lj5A837G66 Lonicera japonica HOM05D004281 ORTHO05D004839 2.8e-14 81.3 42 85.7
Rhsim09G0002300 Rhododendron simsii HOM05D000705 ORTHO05D002970 2.8e-14 81.3 42 88.1
Atru.chr3.1980 Acer truncatum HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
Aa31LG10G14140 Aethionema arabicum HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
Aa31LG1G25720 Aethionema arabicum HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
BcaB01g03334 Brassica carinata HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
BcaB06g29353 Brassica carinata HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
BcaB06g29512 Brassica carinata HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
BcaC01g05189 Brassica carinata HOM05D001249 ORTHO05D003440 3.7e-14 80.9 42 85.7
BcaC02g07139 Brassica carinata HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
A03p24650 Brassica napus HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
A04p33170 Brassica napus HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
C03p29390 Brassica napus HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
C04p70870 Brassica napus HOM05D001249 ORTHO05D003440 3.7e-14 80.9 42 85.7
BolC3t15286H Brassica oleracea HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
BolC4t28587H Brassica oleracea HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
BraA03t11671Z Brassica rapa HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
BraA04t18776Z Brassica rapa HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
Carub.0004s2660 Capsella rubella HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
CARHR139210 Cardamine hirsuta HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
Thhalv10001807m.g Eutrema salsugineum HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
Sp4g26130 Schrenkiella parvula HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
THA.LOC104802349 Tarenaya hassleriana HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
THA.LOC104804375 Tarenaya hassleriana HOM05D004281 ORTHO05D004839 3.7e-14 80.9 42 85.7
Migut.G00913 Erythranthe guttata HOM05D004281 ORTHO05D004839 4.8e-14 80.5 42 88.1
Glyma.08G087500 Glycine max HOM05D004281 ORTHO05D004839 4.8e-14 80.5 42 85.7
Potri.007G146000 Populus trichocarpa HOM05D004281 ORTHO05D004839 4.8e-14 80.5 42 88.1
Prupe.7G270800 Prunus persica HOM05D004281 ORTHO05D004839 4.8e-14 80.5 42 90.5
unitig_578.g16718 Utricularia gibba HOM05D000499 ORTHO05D007471 4.8e-14 80.5 42 90.5
ATR0743G183 Amborella trichopoda HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 83.3
Ciclev10022149m.g Citrus clementina HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 83.3
FvH4_1g00110 Fragaria vesca HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 88.1
FvH4_2g10600 Fragaria vesca HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 88.1
FAN15G1026 Fragaria x ananassa HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 88.1
FAN24G2282 Fragaria x ananassa HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 88.1
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 6.3e-14 80.1 42 88.1
Gohir.A04G135700 Gossypium hirsutum HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 85.7
Gohir.D04G178800 Gossypium hirsutum HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 85.7
Gorai.012G171900 Gossypium raimondii HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 85.7
MD15G1142400 Malus domestica HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 88.1
RcHm_v2.0_Chr2g0084411 Rosa chinensis HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 88.1
Sabra17G0005800 Salix brachista HOM05D004281 ORTHO05D004839 6.3e-14 80.1 42 85.7
Psat5g058760 Pisum sativum HOM05D004281 ORTHO05D004839 8.2e-14 79.7 42 85.7
TPR.G31246 Trifolium pratense HOM05D004281 ORTHO05D004839 8.2e-14 79.7 42 85.7
HanXRQChr13g0392191 Helianthus annuus HOM05D004281 ORTHO05D004839 1.1e-13 79.3 42 81.0
Lj4g0008259 Lotus japonicus HOM05D004281 ORTHO05D004839 1.1e-13 79.3 42 83.3
QL10p064677 Quercus lobata HOM05D004281 ORTHO05D004839 1.1e-13 79.3 42 85.7
QL10p065802 Quercus lobata HOM05D004281 ORTHO05D004839 1.1e-13 79.3 42 85.7
Hund22685 Selenicereus undatus HOM05D001165 ORTHO05D004839 1.1e-13 79.3 42 81.0
vmacro00726 Vaccinium macrocarpon HOM05D004281 ORTHO05D004839 1.1e-13 79.3 42 85.7
HPP92_005601 Vanilla planifolia HOM05D004281 ORTHO05D004839 1.1e-13 79.3 42 85.7
arahy.Tifrunner.gnm1.ann1.HHGT95 Arachis hypogaea HOM05D004281 ORTHO05D004839 1.4e-13 79.0 42 83.3
ClCG08G010210 Citrullus lanatus HOM05D004281 ORTHO05D004839 1.4e-13 79.0 42 88.1
HanXRQChr13g0392171 Helianthus annuus HOM05D004281 ORTHO05D004839 1.4e-13 79.0 42 83.3
Phvul.002G189800 Phaseolus vulgaris HOM05D004281 ORTHO05D004839 1.4e-13 79.0 42 85.7
VMungo0251G0005 Vigna mungo HOM05D004281 ORTHO05D004839 1.4e-13 79.0 42 85.7
AL4G42920 Arabidopsis lyrata HOM05D004281 ORTHO05D004839 1.8e-13 78.6 42 83.3
AT2G44050 Arabidopsis thaliana HOM05D004281 ORTHO05D004839 1.8e-13 78.6 42 83.3
EL10Ac3g06178 Beta vulgaris HOM05D004281 ORTHO05D004839 1.8e-13 78.6 42 78.6
EL10Ac4g08581 Beta vulgaris HOM05D004281 ORTHO05D004839 1.8e-13 78.6 42 78.6
TWI15G0067 Tripterygium wilfordii HOM05D004281 ORTHO05D004839 1.8e-13 78.6 42 83.3
Atru.chr8.1217 Acer truncatum HOM05D004281 ORTHO05D004839 2.4e-13 78.2 42 83.3
Gohir.A11G012100 Gossypium hirsutum HOM05D004281 ORTHO05D004839 2.4e-13 78.2 42 83.3
Lalb_Chr12g0209091 Lupinus albus HOM05D004281 ORTHO05D004839 2.4e-13 78.2 42 83.3
Lalb_Chr13g0292401 Lupinus albus HOM05D004281 ORTHO05D004839 2.4e-13 78.2 42 83.3
Zm00001eb068110 Zea mays HOM05D004281 ORTHO05D004839 3.1e-13 77.8 42 83.3
Zm00001eb432360 Zea mays HOM05D004281 ORTHO05D004839 3.1e-13 77.8 42 83.3
Aqoxy7G00623 Aquilegia oxysepala HOM05D004281 ORTHO05D004839 4.1e-13 77.4 42 88.1
RcHm_v2.0_Chr7g0214271 Rosa chinensis HOM05D004281 ORTHO05D004839 4.1e-13 77.4 42 85.7
CDE09G0590 Ceratophyllum demersum HOM05D004281 ORTHO05D004839 5.3e-13 77.0 42 81.0
RcHm_v2.0_Chr7g0227511 Rosa chinensis HOM05D004281 ORTHO05D004839 5.3e-13 77.0 42 85.7
SMO198G0030 Selaginella moellendorffii HOM05D004281 ORTHO05D004839 5.3e-13 77.0 42 83.3
Os04g0497400 Oryza sativa ssp. japonica HOM05D004281 ORTHO05D004839 6.9e-13 76.6 42 81.0
Ca_18245_v3 Cicer arietinum L. HOM05D004281 ORTHO05D004839 9.1e-13 76.3 42 78.6
FAN26G2986 Fragaria x ananassa HOM05D000705 ORTHO05D004839 9.1e-13 76.3 42 85.7
Gohir.D11G011300 Gossypium hirsutum HOM05D004281 ORTHO05D004839 9.1e-13 76.3 42 81.0
Gorai.007G012700 Gossypium raimondii HOM05D004281 ORTHO05D004839 9.1e-13 76.3 42 81.0
CAN.G607.11 Capsicum annuum HOM05D004281 ORTHO05D004839 1.2e-12 75.9 42 81.0
Nitab4.5_0000668g0110 Nicotiana tabacum HOM05D004281 ORTHO05D004839 1.2e-12 75.9 42 81.0
Nitab4.5_0001110g0040 Nicotiana tabacum HOM05D004281 ORTHO05D004839 1.2e-12 75.9 42 81.0
Solyc08g015660.3 Solanum lycopersicum HOM05D004281 ORTHO05D004839 1.2e-12 75.9 42 81.0
Solyc12g096590.3 Solanum lycopersicum HOM05D004281 ORTHO05D004839 1.2e-12 75.9 42 81.0
Sopen08g005770 Solanum pennellii HOM05D004281 ORTHO05D004839 1.2e-12 75.9 42 81.0
Sopen12g032420 Solanum pennellii HOM05D004281 ORTHO05D004839 1.2e-12 75.9 42 81.0
PGSC0003DMG400025217 Solanum tuberosum HOM05D004281 ORTHO05D004839 1.2e-12 75.9 42 81.0
PGSC0003DMG400029273 Solanum tuberosum HOM05D004281 ORTHO05D004839 1.2e-12 75.9 42 81.0
unitig_85.g27225 Utricularia gibba HOM05D004281 ORTHO05D004839 1.5e-12 75.5 42 85.7
PGR142G1214 Punica granatum HOM05D004281 ORTHO05D004839 2.0e-12 75.1 42 81.0
CsaV3_6G032410 Cucumis sativus L. HOM05D004281 ORTHO05D004839 2.6e-12 74.7 42 81.0
Peaxi162Scf00459g00125 Petunia axillaris HOM05D004281 ORTHO05D004839 2.6e-12 74.7 42 78.6
CAN.G566.44 Capsicum annuum HOM05D004281 ORTHO05D004839 3.4e-12 74.3 42 78.6
Nitab4.5_0001091g0070 Nicotiana tabacum HOM05D004281 ORTHO05D004839 3.4e-12 74.3 42 78.6
Nitab4.5_0004802g0010 Nicotiana tabacum HOM05D004281 ORTHO05D004839 3.4e-12 74.3 42 78.6
PSO675G2617 Papaver somniferum HOM05D004281 ORTHO05D004839 4.5e-12 73.9 42 78.6
PSO732G0016 Papaver somniferum HOM05D004281 ORTHO05D004839 4.5e-12 73.9 42 78.6
Nitab4.5_0010298g0020 Nicotiana tabacum HOM05D004281 ORTHO05D004839 7.7e-12 73.2 42 76.2
Sed0015421 Sechium edule HOM05D004281 ORTHO05D004839 7.7e-12 73.2 42 81.0
Lsat_1_v5_gn_8_33320 Lactuca sativa HOM05D004281 ORTHO05D004839 1.0e-11 72.8 42 73.8
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 2.2e-11 71.6 42 73.8
Sed0022244 Sechium edule HOM05D004281 ORTHO05D004839 3.8e-11 70.9 42 81.0
TPR.G18090 Trifolium pratense HOM05D004281 ORTHO05D004839 8.5e-11 69.7 45 77.8
Mapoly0120s0006 Marchantia polymorpha HOM05D004281 ORTHO05D004839 1.9e-10 68.6 42 71.4
Pp3c16_5700 Physcomitrium patens HOM05D004281 ORTHO05D004839 5.5e-10 67.0 42 71.4
Pp3c27_2710 Physcomitrium patens HOM05D004281 ORTHO05D004839 5.5e-10 67.0 42 71.4
CBR_g29269 Chara braunii HOM05D004281 ORTHO05D004839 1.6e-09 65.5 42 69.0
MELO3C011439.2 Cucumis melo HOM05D004281 ORTHO05D004839 6.1e-09 63.5 42 73.8
BcaB01g03343 Brassica carinata HOM05D001249 ORTHO05D003440 7.9e-09 63.2 49 67.3
Cre02.g088850 Chlamydomonas reinhardtii HOM05D004281 ORTHO05D004839 4.4e-07 57.4 42 61.9
Cpa.g.sc9.245 Carica papaya HOM05D004281 ORTHO05D004839 8.2e-06 53.1 47 61.7
Duzib212G0492 Durio zibethinus HOM05D004281 ORTHO05D004839 8.2e-06 53.1 28 92.9
Sc13g0007610 Simmondsia chinensis HOM05D004281 ORTHO05D004839 8.2e-06 53.1 32 84.4


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