Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g00790 Coffea canephora HOM05D000103 ORTHO05D154129 1.8e-37 158.7 78 100.0
Cc01_g09620 Coffea canephora HOM05D000103 ORTHO05D000049 7.3e-10 67.0 73 46.6
Migut.O00647 Erythranthe guttata HOM05D000103 ORTHO05D000049 6.2e-09 63.9 75 38.7
Haze_23437 Corylus avellana HOM05D000103 ORTHO05D000049 5.2e-08 60.8 48 58.3
Lj1C223T4 Lonicera japonica HOM05D000103 ORTHO05D000049 5.2e-08 60.8 45 57.8
Lj1C247T8 Lonicera japonica HOM05D000103 ORTHO05D000049 5.2e-08 60.8 45 57.8
Haze_23436 Corylus avellana HOM05D000103 ORTHO05D000049 8.9e-08 60.1 48 58.3
CAN.G644.18 Capsicum annuum HOM05D000103 ORTHO05D000049 1.2e-07 59.7 62 48.4
Oeu058278.3 Olea europaea HOM05D000103 ORTHO05D000049 1.5e-07 59.3 62 50.0
PGR119G0083 Punica granatum HOM05D000103 ORTHO05D000049 1.5e-07 59.3 75 42.7
Cfa010071 Carpinus fangiana HOM05D000103 ORTHO05D000049 2.6e-07 58.5 47 57.4
Dinv42582 Davidia involucrata HOM05D000103 ORTHO05D000049 2.6e-07 58.5 46 60.9
SalBow6G4899 Salvia bowleyana HOM05D000103 ORTHO05D000049 2.6e-07 58.5 55 49.1
Oeu050196.1 Olea europaea HOM05D000103 ORTHO05D000049 3.4e-07 58.2 58 51.7
PGSC0003DMG400026543 Solanum tuberosum HOM05D000103 ORTHO05D000049 4.4e-07 57.8 62 48.4
Sopen11g026710 Solanum pennellii HOM05D000103 ORTHO05D000049 9.8e-07 56.6 62 46.8
Manes.11G159000 Manihot esculenta HOM05D000103 ORTHO05D000049 1.3e-06 56.2 48 52.1
QL01p013408 Quercus lobata HOM05D000103 ORTHO05D000049 1.7e-06 55.8 61 47.5
Gorai.012G023600 Gossypium raimondii HOM05D000103 ORTHO05D000049 2.2e-06 55.5 41 58.5
CiPaw.13G139800 Carya illinoinensis HOM05D000103 ORTHO05D000049 2.9e-06 55.1 46 58.7
Peaxi162Scf00002g05435 Petunia axillaris HOM05D000103 ORTHO05D000049 2.9e-06 55.1 62 45.2
COL.COLO4_20101 Corchorus olitorius HOM05D000103 ORTHO05D000049 3.7e-06 54.7 51 49.0
PGR119G0243 Punica granatum HOM05D000103 ORTHO05D000049 3.7e-06 54.7 46 50.0
Solyc11g067000.3 Solanum lycopersicum HOM05D000103 ORTHO05D000049 3.7e-06 54.7 62 45.2
Gohir.A05G395200 Gossypium hirsutum HOM05D000103 ORTHO05D000049 4.9e-06 54.3 41 56.1
Gohir.D04G019800 Gossypium hirsutum HOM05D000103 ORTHO05D000049 4.9e-06 54.3 41 56.1
QL04p042717 Quercus lobata HOM05D000103 ORTHO05D000049 4.9e-06 54.3 51 51.0
TAR623G0536 Trochodendron aralioides HOM05D000103 ORTHO05D000049 4.9e-06 54.3 42 54.8
vmacro07385 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 4.9e-06 54.3 37 59.5
CsaV3_6G014800 Cucumis sativus L. HOM05D000103 ORTHO05D000049 6.4e-06 53.9 57 45.6
Prupe.6G121200 Prunus persica HOM05D000103 ORTHO05D000049 6.4e-06 53.9 45 53.3
vmacro07386 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 6.4e-06 53.9 37 56.8
Lj2C990T4 Lonicera japonica HOM05D000103 ORTHO05D000049 8.3e-06 53.5 49 51.0
TAR633G0417 Trochodendron aralioides HOM05D000103 ORTHO05D000049 8.3e-06 53.5 42 52.4
vmacro03290 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 8.3e-06 53.5 45 57.8


User provided reference genes

Program Settings