Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g17020 Coffea canephora HOM05D018109 ORTHO05D017864 2.9e-152 542.0 295 100.0
Cc04_g17040 Coffea canephora HOM05D008788 ORTHO05D017864 6.7e-24 115.5 317 33.1
Cc04_g17050 Coffea canephora HOM05D000281 ORTHO05D009440 3.7e-14 83.2 231 32.5
Hma1.2p1_0104F.1_g050070 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 1.4e-13 81.3 212 30.2
Hma1.2p1_0104F.1_g050076 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 1.4e-13 81.3 212 30.2
TAR626G1978 Trochodendron aralioides HOM05D000036 ORTHO05D002265 1.8e-13 80.9 226 30.5
TAR624G0531 Trochodendron aralioides HOM05D000036 ORTHO05D002265 1.6e-12 77.8 211 28.9
Migut.D01839 Erythranthe guttata HOM05D018109 ORTHO05D017864 6.5e-11 72.4 285 25.3
Hma1.2p1_0735F.1_g210420 Hydrangea macrophylla HOM05D000281 ORTHO05D009440 6.5e-11 72.4 210 31.4
RcHm_v2.0_Chr2g0147861 Rosa chinensis HOM05D000036 ORTHO05D002265 6.5e-11 72.4 247 27.5
Actinidia21837 Actinidia chinensis HOM05D000036 ORTHO05D002265 2.5e-10 70.5 202 27.7
Lsat_1_v5_gn_5_18821 Lactuca sativa HOM05D000036 ORTHO05D009440 2.5e-10 70.5 214 28.0
A05p17870 Brassica napus HOM05D000036 ORTHO05D002265 4.2e-10 69.7 226 27.4
BraA05t20677Z Brassica rapa HOM05D000036 ORTHO05D002265 4.2e-10 69.7 226 27.4
COL.COLO4_30864 Corchorus olitorius HOM05D000036 ORTHO05D002265 4.2e-10 69.7 190 31.6
Actinidia24427 Actinidia chinensis HOM05D000036 ORTHO05D002265 7.2e-10 68.9 197 26.9
Dinv19941 Davidia involucrata HOM05D000036 ORTHO05D009440 9.4e-10 68.6 152 33.6
FAN02G4144 Fragaria x ananassa HOM05D000036 ORTHO05D002265 1.2e-09 68.2 246 26.4
FAN05G2733 Fragaria x ananassa HOM05D000036 ORTHO05D002265 1.2e-09 68.2 246 26.4
BolC6t36710H Brassica oleracea HOM05D000036 ORTHO05D002265 3.6e-09 66.6 226 27.0
Medtr8g023150 Medicago truncatula HOM05D000036 ORTHO05D002265 3.6e-09 66.6 170 32.4
Cpa.g.sc25.193 Carica papaya HOM05D000036 ORTHO05D002265 4.7e-09 66.2 159 33.3
Potri.006G134800 Populus trichocarpa HOM05D000036 ORTHO05D002265 1.4e-08 64.7 233 23.6
Manes.14G076700 Manihot esculenta HOM05D000281 ORTHO05D009440 1.8e-08 64.3 221 27.1
Carub.0001s4312 Capsella rubella HOM05D000036 ORTHO05D002265 6.8e-08 62.4 190 28.4
MBI13_g01661_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D002265 2.0e-07 60.8 186 25.3
Sp1g40330 Schrenkiella parvula HOM05D000036 ORTHO05D002265 2.6e-07 60.5 170 28.8
THA.LOC104815596 Tarenaya hassleriana HOM05D000036 ORTHO05D002265 2.6e-07 60.5 222 25.7
CSS0005969 Camellia sinensis var. sinensis HOM05D008788 ORTHO05D009440 3.4e-07 60.1 232 29.3
Duzib068G0437 Durio zibethinus HOM05D000281 ORTHO05D009440 3.4e-07 60.1 238 26.1
vmacro18768 Vaccinium macrocarpon HOM05D000036 ORTHO05D002265 4.4e-07 59.7 150 26.7
AL1G62550 Arabidopsis lyrata HOM05D000036 ORTHO05D002265 5.7e-07 59.3 170 28.2
BcaC08g44138 Brassica carinata HOM05D000036 ORTHO05D002265 5.7e-07 59.3 226 26.1
C06p15380 Brassica napus HOM05D000036 ORTHO05D002265 5.7e-07 59.3 226 26.1
COL.COLO4_30869 Corchorus olitorius HOM05D000036 ORTHO05D002265 5.7e-07 59.3 193 29.5
Thhalv10011342m.g Eutrema salsugineum HOM05D000036 ORTHO05D002265 5.7e-07 59.3 170 28.2
Duzib168G1886 Durio zibethinus HOM05D000036 ORTHO05D002265 7.5e-07 58.9 231 23.4
Migut.D01840 Erythranthe guttata HOM05D018109 ORTHO05D017864 9.8e-07 58.5 187 27.8
Oeu060794.1 Olea europaea HOM05D018110 ORTHO05D017864 1.3e-06 58.2 193 26.4
CiPaw.05G250800 Carya illinoinensis HOM05D000036 ORTHO05D000095 2.2e-06 57.4 169 30.2
Phvul.010G123132 Phaseolus vulgaris HOM05D000036 ORTHO05D002265 2.2e-06 57.4 168 29.2
BcaC08g43560 Brassica carinata HOM05D000036 ORTHO05D002265 2.8e-06 57.0 168 28.6
DCAR_028535 Daucus carota HOM05D000036 ORTHO05D002265 2.8e-06 57.0 102 30.4
Manes.03G057000 Manihot esculenta HOM05D000036 ORTHO05D002265 2.8e-06 57.0 145 29.0
Carub.0003s1400 Capsella rubella HOM05D000036 ORTHO05D002265 3.7e-06 56.6 171 26.3
AT1G53840 Arabidopsis thaliana HOM05D000036 ORTHO05D002265 4.8e-06 56.2 170 27.6
CiPaw.11G042300 Carya illinoinensis HOM05D000036 ORTHO05D009440 4.8e-06 56.2 212 27.8
Gohir.A11G030341 Gossypium hirsutum HOM05D000281 ORTHO05D009440 4.8e-06 56.2 224 23.7
Lalb_Chr04g0253941 Lupinus albus HOM05D000036 ORTHO05D002265 4.8e-06 56.2 169 27.2
Oeu053422.1 Olea europaea HOM05D000036 ORTHO05D002265 4.8e-06 56.2 216 22.7
Thecc.09G068800 Theobroma cacao HOM05D000036 ORTHO05D002265 4.8e-06 56.2 216 23.6
Cfa003461 Carpinus fangiana HOM05D000036 ORTHO05D000095 6.3e-06 55.8 194 26.8
Haze_16136 Corylus avellana HOM05D000036 ORTHO05D002265 6.3e-06 55.8 192 26.6
ECA234G1515 Erigeron canadensis HOM05D000036 ORTHO05D009440 6.3e-06 55.8 222 26.1
Gohir.D11G033600 Gossypium hirsutum HOM05D000281 ORTHO05D009440 6.3e-06 55.8 225 24.9
MSTRG.10910 Avicennia marina HOM05D000036 ORTHO05D002265 8.3e-06 55.5 227 23.3


User provided reference genes

Program Settings