Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g16800 Coffea canephora HOM05D007305 ORTHO05D009886 2.6e-77 292.0 145 100.0
CANSAT35G1669 Cannabis sativa HOM05D007305 ORTHO05D009886 7.4e-24 114.4 72 77.8
Thecc.04G308500 Theobroma cacao HOM05D007305 ORTHO05D009886 7.4e-24 114.4 70 74.3
Sabra11G0081600 Salix brachista HOM05D007305 ORTHO05D009886 3.7e-23 112.1 70 72.9
Gohir.D05G352126 Gossypium hirsutum HOM05D007305 ORTHO05D009886 4.8e-23 111.7 77 67.5
Gorai.009G383800 Gossypium raimondii HOM05D007305 ORTHO05D009886 4.8e-23 111.7 77 67.5
Gorai.009G450700 Gossypium raimondii HOM05D007305 ORTHO05D009886 4.8e-23 111.7 77 67.5
Gohir.A04G032550 Gossypium hirsutum HOM05D007305 ORTHO05D009886 1.4e-22 110.2 77 66.2
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 6.9e-22 107.8 70 70.0
Gohir.D03G068902 Gossypium hirsutum HOM05D007305 ORTHO05D009886 9.0e-22 107.5 112 50.0
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 2.0e-21 106.3 71 66.2
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 2.0e-21 106.3 71 66.2
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 4.5e-21 105.1 71 66.2
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 4.5e-21 105.1 71 66.2
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 5.8e-21 104.8 71 64.8
Manes.06G030066 Manihot esculenta HOM05D007305 ORTHO05D009886 1.0e-20 104.0 70 67.1
Gorai.003G091400 Gossypium raimondii HOM05D007305 ORTHO05D009886 1.3e-20 103.6 112 48.2
Manes.09G001301 Manihot esculenta HOM05D007305 ORTHO05D009886 1.4e-19 100.1 70 67.1
Manes.13G089260 Manihot esculenta HOM05D007305 ORTHO05D009886 2.1e-18 96.3 70 61.4
Thecc.02G280700 Theobroma cacao HOM05D007305 ORTHO05D009886 2.7e-18 95.9 56 73.2
Thecc.07G142000 Theobroma cacao HOM05D007305 ORTHO05D009886 3.5e-18 95.5 58 70.7
Gohir.A05G322708 Gossypium hirsutum HOM05D007305 ORTHO05D009886 3.0e-17 92.4 70 60.0
SHI35106 Sapria himalayana HOM05D007305 ORTHO05D009886 3.9e-17 92.0 70 57.1
SHI17822 Sapria himalayana HOM05D000002 ORTHO05D009886 1.5e-16 90.1 66 57.6
SHI11625 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-16 88.2 71 49.3
Cpa.g.sc74.28 Carica papaya HOM05D007305 ORTHO05D009886 7.4e-16 87.8 81 59.3
SHI27057 Sapria himalayana HOM05D007305 ORTHO05D009886 7.4e-16 87.8 70 55.7
SHI31578 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-15 86.7 70 55.7
Manes.07G072314 Manihot esculenta HOM05D007305 ORTHO05D009886 2.8e-15 85.9 53 67.9
SHI37667 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-15 84.7 70 52.9
Thecc.05G175600 Theobroma cacao HOM05D007305 ORTHO05D009886 2.4e-14 82.8 46 78.3
SHI30681 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-13 80.5 57 57.9
SHI12340 Sapria himalayana HOM05D000002 ORTHO05D009886 2.0e-13 79.7 61 55.7
Manes.09G019650 Manihot esculenta HOM05D007305 ORTHO05D009886 5.0e-12 75.1 70 54.3
SHI14995 Sapria himalayana HOM05D007305 ORTHO05D009886 6.5e-12 74.7 54 57.4
Cpa.g.sc114.45 Carica papaya HOM05D007305 ORTHO05D009886 8.5e-12 74.3 48 72.9
SHI03731 Sapria himalayana HOM05D007305 ORTHO05D009886 1.4e-09 67.0 76 43.4
TWI79G0335 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 7.4e-08 61.2 73 38.4
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 2.8e-07 59.3 50 52.0
SHI36811 Sapria himalayana HOM05D007305 ORTHO05D009886 4.8e-07 58.5 50 48.0
SHI36830 Sapria himalayana HOM05D007305 ORTHO05D009886 4.8e-07 58.5 50 48.0
SHI27433 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-07 57.8 44 52.3
SHI25004 Sapria himalayana HOM05D007305 ORTHO05D009886 1.4e-06 57.0 45 55.6
SHI27171 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 56.2 44 52.3
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-06 55.8 76 40.8
Cpa.g.sc25.135 Carica papaya HOM05D000002 ORTHO05D000047 4.1e-06 55.5 69 40.6
SHI21600 Sapria himalayana HOM05D000002 ORTHO05D009886 4.1e-06 55.5 39 59.0
SHI26716 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-06 55.1 49 49.0
SHI35060 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-06 55.1 39 56.4


User provided reference genes

Program Settings