Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 5.4e-204 714.1 374 100.0
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 5.2e-146 521.5 378 72.5
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 3.3e-145 518.8 379 70.7
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 3.3e-145 518.8 376 72.6
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 5.7e-145 518.1 378 72.2
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 2.4e-143 512.7 381 70.3
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 7.7e-142 507.7 381 70.3
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.2e-141 506.1 378 72.8
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.2e-141 506.1 378 72.8
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 2.7e-139 499.2 379 71.2
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 2.7e-139 499.2 374 69.3
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 3.6e-139 498.8 379 69.7
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 8.0e-139 497.7 376 69.9
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 8.0e-139 497.7 379 69.9
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.4e-138 496.9 374 68.7
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.4e-138 496.9 377 69.8
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 6.8e-138 494.6 377 67.6
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 6.8e-138 494.6 375 70.9
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 8.8e-138 494.2 379 68.9
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 1.5e-137 493.4 376 67.8
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 2.0e-137 493.0 309 79.3
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 2.6e-137 492.7 340 74.1
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 5.7e-137 491.5 377 67.4
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 7.5e-137 491.1 375 70.1
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.7e-136 490.0 379 67.0
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 2.2e-136 489.6 378 68.3
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 2.2e-136 489.6 377 67.4
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 2.8e-136 489.2 377 67.9
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 3.7e-136 488.8 375 66.7
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 3.7e-136 488.8 372 69.4
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 4.8e-136 488.4 375 67.2
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 1.8e-135 486.5 379 68.6
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 1.8e-135 486.5 378 66.1
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 1.8e-135 486.5 377 66.8
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 2.7e-134 482.6 375 68.3
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 3.5e-134 482.3 378 67.2
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 5.9e-134 481.5 380 66.1
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 3.8e-133 478.8 378 65.1
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 5.0e-133 478.4 377 67.6
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 8.6e-133 477.6 379 64.9
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 8.6e-133 477.6 364 69.0
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 8.6e-133 477.6 365 68.8
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 3.3e-132 475.7 304 78.0
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 3.3e-132 475.7 378 65.9
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 5.5e-132 474.9 379 64.6
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 9.5e-132 474.2 383 66.1
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.2e-131 473.8 348 69.0
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 1.6e-131 473.4 379 67.0
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 2.1e-131 473.0 372 66.4
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 1.0e-130 470.7 381 63.5
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 1.4e-130 470.3 365 68.2
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 3.0e-130 469.2 295 78.0
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 4.0e-130 468.8 376 65.2
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 6.8e-130 468.0 310 74.8
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 1.5e-129 466.8 309 74.4
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 2.6e-129 466.1 310 74.5
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 2.6e-129 466.1 330 70.9
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 4.4e-129 465.3 376 65.2
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 4.4e-129 465.3 376 64.4
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 7.5e-129 464.5 349 66.8
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.7e-128 463.4 379 65.2
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 3.7e-128 462.2 377 64.5
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 6.3e-128 461.5 348 68.1
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 8.3e-128 461.1 343 67.9
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 1.4e-127 460.3 378 64.6
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 7.0e-127 458.0 376 65.4
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 1.2e-126 457.2 382 62.8
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 2.0e-126 456.4 364 65.1
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 3.5e-126 455.7 382 66.8
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 4.5e-126 455.3 377 64.5
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 5.9e-126 454.9 377 64.5
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 7.8e-126 454.5 377 63.4
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 1.7e-125 453.4 377 64.2
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 3.8e-125 452.2 379 63.6
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 3.8e-125 452.2 281 79.0
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 8.6e-125 451.1 344 68.0
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.9e-124 449.9 281 77.9
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 5.6e-124 448.4 424 58.3
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 1.6e-123 446.8 377 63.1
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 4.7e-123 445.3 329 67.5
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 6.1e-123 444.9 354 65.5
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.4e-122 443.7 365 63.6
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.8e-122 443.4 304 71.7
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 1.2e-121 440.7 369 60.2
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 2.6e-121 439.5 371 62.8
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 7.5e-121 438.0 335 67.5
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 2.8e-115 419.5 309 64.4
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.3e-114 416.4 308 67.9
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 2.7e-110 402.9 491 49.9
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.3e-104 384.0 275 68.7
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 4.9e-104 382.1 251 75.3
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 7.3e-100 368.2 377 54.4
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 6.4e-96 355.1 306 58.5
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 6.4e-96 355.1 306 58.5
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 2.4e-95 353.2 325 55.7
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 6.0e-94 348.6 205 84.9
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 3.0e-93 346.3 279 61.3
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.9e-92 343.6 233 73.0
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 1.3e-88 330.9 227 71.8
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 6.9e-82 308.5 250 63.2
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 6.9e-50 202.2 223 51.6
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 5.0e-40 169.5 156 52.6
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 1.9e-39 167.5 125 72.0
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 2.7e-38 163.7 172 52.9
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.3e-35 154.8 165 54.5
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 6.3e-27 125.9 96 66.7
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.1e-26 125.2 85 74.1
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 2.9e-24 117.1 150 48.0
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 3.0e-21 107.1 102 51.0
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.5e-20 104.8 135 45.2
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 7.0e-18 95.9 86 58.1
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 3.3e-07 60.5 48 64.6
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 3.3e-07 60.5 48 64.6


User provided reference genes

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