Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 1.1e-153 546.6 268 100.0
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 2.6e-107 392.5 265 69.4
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 2.6e-107 392.5 255 72.9
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 1.7e-106 389.8 264 70.5
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 2.2e-106 389.4 252 72.6
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 2.9e-106 389.0 254 73.2
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 4.9e-106 388.3 256 71.5
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 3.2e-105 385.6 260 70.4
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 5.4e-105 384.8 260 70.0
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 1.6e-104 383.3 255 71.0
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 3.5e-104 382.1 257 71.6
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 4.6e-104 381.7 249 72.3
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 6.0e-104 381.3 256 71.9
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 1.1e-102 377.1 244 72.5
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 1.1e-102 377.1 247 72.9
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.3e-102 375.2 252 70.6
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 4.3e-102 375.2 262 68.3
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 4.3e-102 375.2 263 70.0
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 1.6e-101 373.2 252 71.0
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 1.6e-101 373.2 261 67.4
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 3.6e-101 372.1 260 69.6
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 3.6e-101 372.1 246 72.4
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.1e-100 370.5 260 69.6
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.1e-100 370.5 243 72.4
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 5.2e-100 368.2 260 68.8
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 5.2e-100 368.2 242 71.9
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 8.9e-100 367.5 255 71.0
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 8.9e-100 367.5 263 65.4
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 1.2e-99 367.1 262 66.4
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.0e-99 366.3 256 70.3
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 2.0e-99 366.3 283 64.0
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 4.4e-99 365.2 256 67.6
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 7.6e-99 364.4 249 70.3
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 9.9e-99 364.0 254 68.1
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 1.3e-98 363.6 256 66.0
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 1.3e-98 363.6 257 66.5
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.3e-98 363.6 256 70.3
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.7e-98 363.2 256 69.5
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.9e-98 362.5 256 69.9
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 2.9e-98 362.5 254 68.5
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 3.8e-98 362.1 253 68.4
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 3.8e-98 362.1 254 67.7
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 6.4e-98 361.3 254 68.9
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 1.1e-97 360.5 256 69.5
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 2.4e-97 359.4 254 67.3
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 2.4e-97 359.4 252 65.5
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 3.2e-97 359.0 242 70.2
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 2.7e-96 355.9 253 68.4
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 2.7e-96 355.9 254 65.0
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 3.5e-96 355.5 290 62.8
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 4.6e-96 355.1 255 67.5
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 4.6e-96 355.1 255 67.5
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 4.6e-96 355.1 257 66.1
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 6.0e-96 354.8 252 66.7
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 7.8e-96 354.4 263 65.8
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 7.8e-96 354.4 253 66.0
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 7.8e-96 354.4 249 65.1
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 3.0e-95 352.4 250 65.6
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 5.1e-95 351.7 250 65.6
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 8.7e-95 350.9 263 63.1
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 1.5e-94 350.1 254 64.2
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 1.5e-94 350.1 255 65.9
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 1.9e-94 349.7 254 66.5
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 3.3e-94 349.0 261 62.5
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 4.3e-94 348.6 255 65.1
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 4.3e-94 348.6 250 64.8
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 5.6e-94 348.2 251 66.5
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 2.1e-93 346.3 267 64.4
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 2.1e-93 346.3 267 64.8
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 4.7e-93 345.1 240 67.9
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 8.1e-93 344.4 252 63.5
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 1.1e-92 344.0 246 63.8
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 4.0e-92 342.0 255 65.5
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 4.0e-92 342.0 266 61.7
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 5.3e-92 341.7 248 64.5
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 5.3e-92 341.7 250 63.6
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 5.3e-92 341.7 254 61.8
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 1.5e-91 340.1 243 66.3
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 4.4e-91 338.6 254 61.0
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 7.6e-91 337.8 245 63.3
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 9.9e-91 337.4 301 56.8
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 9.9e-91 337.4 246 63.0
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.3e-90 337.0 260 61.5
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 1.3e-90 337.0 246 61.8
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 2.9e-90 335.9 266 60.9
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 2.9e-90 335.9 246 61.8
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 2.9e-90 335.9 225 70.7
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 3.8e-90 335.5 261 61.7
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 3.8e-90 335.5 249 63.9
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 3.8e-90 335.5 249 63.9
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 6.4e-90 334.7 257 61.5
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 8.4e-90 334.3 254 60.2
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 1.1e-89 334.0 254 60.6
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.1e-89 334.0 254 61.0
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 2.4e-89 332.8 260 61.2
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 5.4e-89 331.6 261 61.3
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 5.4e-89 331.6 261 60.5
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 7.1e-89 331.3 254 60.2
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 7.1e-89 331.3 249 67.5
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 4.6e-88 328.6 254 61.4
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 7.8e-88 327.8 243 61.7
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 3.0e-87 325.9 254 61.4
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 3.9e-87 325.5 243 61.3
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 3.9e-87 325.5 243 61.3
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 2.1e-85 319.7 254 61.8
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 1.4e-84 317.0 260 59.2
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 2.4e-84 316.2 262 59.9
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 6.0e-80 301.6 204 69.6
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 6.0e-80 301.6 276 55.4
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 1.3e-79 300.4 168 82.1
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.3e-79 299.7 204 69.1
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 2.5e-78 296.2 207 67.6
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 1.8e-76 290.0 188 70.7
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 4.0e-76 288.9 218 61.5
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 1.2e-75 287.3 265 56.2
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 3.4e-75 285.8 189 71.4
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 7.1e-73 278.1 221 57.9
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 4.8e-69 265.4 254 52.8
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 1.8e-68 263.5 226 56.2
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 4.5e-67 258.8 225 53.3
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.9e-66 255.4 241 53.9
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.6e-64 250.4 193 57.5
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 3.0e-63 246.1 222 50.9
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 6.7e-63 245.0 183 61.2
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 6.5e-58 228.4 172 61.0
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 3.2e-57 226.1 249 48.2
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 1.6e-56 223.8 228 50.9
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 2.3e-55 219.9 196 55.1
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 2.0e-54 216.9 128 75.8
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 5.5e-49 198.7 139 67.6
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 1.0e-47 194.5 254 43.3
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 1.8e-47 193.7 144 63.2
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 5.7e-46 188.7 222 44.1
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 2.2e-45 186.8 126 69.0
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 3.7e-45 186.0 287 40.1
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 2.2e-42 176.8 129 60.5
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.9e-42 176.4 107 75.7
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.1e-41 174.5 138 59.4
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 1.6e-40 170.6 260 38.1
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 2.7e-40 169.9 124 65.3
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.8e-39 167.2 212 44.8
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.6e-27 127.5 106 56.6
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 5.9e-27 125.6 79 70.9
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 3.1e-20 103.2 105 46.7
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 2.0e-19 100.5 65 64.6
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 9.5e-17 91.7 60 75.0
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 3.2e-12 76.6 70 54.3
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 2.3e-07 60.5 154 26.6
Pp3c1_38790 Physcomitrium patens HOM05D004915 ORTHO05D315101 4.4e-06 56.2 40 67.5


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